Acyrthosiphon pisum (pea aphid): 100163977
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Entry
100163977 CDS
T01076
Name
(RefSeq) cleavage stimulation factor subunit 1-like isoform X2
KO
K14406
cleavage stimulation factor subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100163977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100163977
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100163977
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
CSTF1_dimer
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_VPS8
Beta-prop_NOL10_N
Beta-prop_Aladin
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
DSE1_N
PAC11
ASA1
WD40_RFWD3
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SCAP
Beta-prop_SPT8
Ge1_WD40
Beta-prop_HPS5
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR11_1st
DUF5899
PD40
Motif
Other DBs
NCBI-GeneID:
100163977
NCBI-ProteinID:
XP_016662801
APHIDBASE:
ACYPI005025
UniProt:
A0A8R2HAH5
LinkDB
All DBs
Position
A2
Genome browser
AA seq
433 aa
AA seq
DB search
MSEINNGKPEMCIKDSDHLYRLIISQLFYDGHTSIASSLAVQVNADPPCSPSDRLRSVVM
KGLQHETDRQKESEQALNLNPIQQMLIGPGIDLEFDTDVICTAPQPSLYETIYVTSHKGA
CNAGAFSPDGQLIATGSSDASIKILDIERMLAKAHEIGSTDIIEGQGHPVIRTLYDHLEG
VTCLDFHPNKPILASGSRDCHVKFFDYSKITVKKAYKTITDVVPIRCISFHPLGNYMVVG
TNCPIIRLYDINTVQSYVCSVPSQQHTGPVTSIKFEPGAKYFVSSSRDGSIKLWDGVSNK
CVNTFERAHNGSQVCSVTFSRNGKYILSSGKDSLVKLWELSTSRCLIAYTGAGTIGKQEH
HTQALFNHTEEFVMFPDEVTTSLCTWNARNASRQNLLSLGHNGPIRSIVHSPNSAAFLTC
SDDFRARFWCIRH
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaataaataatggcaaacctgaaatgtgtattaaggatagtgatcatttatac
agactcattataagtcaacttttttatgatgggcatacatcaattgcttcaagcttagct
gttcaagtgaatgctgatccaccttgttctccatcggatcgacttaggagtgtagtgatg
aaaggtttacaacatgaaaccgacagacaaaaagaatctgaacaagcattaaacttaaat
ccaatccaacaaatgttaatcggaccggggatcgatttggaatttgatactgatgttatt
tgtactgctcctcaaccatcgctttatgaaactatatatgtaacatcccacaaaggtgcc
tgtaacgctggtgcttttagtccggacggacagttaattgcaacaggaagcagtgatgca
tcaatcaaaattttggatattgaaagaatgctggctaaagcacacgagattggtagcact
gatattatagaaggacaaggtcatccagtaattcggactttgtatgatcatttggaagga
gtgacatgcttggattttcaccctaacaaaccaattttggcttcaggttctagagattgt
catgttaaattttttgattattcaaaaataactgtgaaaaaagcgtacaagacaataacc
gatgtggtaccaataagatgtataagttttcatccccttggaaactatatggtagtgggc
accaattgcccaatcataagactttatgacataaatacggttcaaagttatgtatgttca
gttcctagccaacaacatactggtcctgttacatcaataaagtttgaaccaggtgccaaa
tactttgtgtcctctagtcgagatggttcaattaaattgtgggacggcgtgtctaataaa
tgtgttaacacctttgaaagagcacacaatggtagtcaagtgtgttctgtgacattttca
agaaatggaaagtacatcttgtcatcaggcaaagattctttagtgaaactttgggagttg
tctactagtagatgcctgattgcatatactggagctggaaccataggaaaacaagaacac
catactcaagcattgtttaatcatactgaggagtttgtcatgtttccagatgaagtcact
acatcgttgtgtacatggaatgcacggaatgcttctcgacagaatcttttatcactgggc
cataatggacctattcgttcaatagtgcattctccaaattcagcagcatttttgacttgt
tcggatgactttagagcccgtttttggtgtataagacactag
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