Acyrthosiphon pisum (pea aphid): 100164192
Help
Entry
100164192 CDS
T01076
Name
(RefSeq) collagen alpha-1(I) chain
KO
K19719
collagen type II alpha
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api04512
ECM-receptor interaction
api04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
api00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100164192
04518 Integrin signaling
100164192
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
api00536
]
100164192
Glycosaminoglycan binding proteins [BR:
api00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100164192
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
100164192
NCBI-ProteinID:
XP_001942763
APHIDBASE:
ACYPI005228
UniProt:
A0A8R2A1Q4
LinkDB
All DBs
Position
A3:complement(18642008..18670808)
Genome browser
AA seq
1757 aa
AA seq
DB search
MHGPSSTVACALWLTCVALLLAAEGAAPGARRHDRRVRPGSAVAADRSANDAAGAAMDVD
DYDRDNYDEDYEDSGDSQKRPPPPPPPPPPPKTSASLTPDHRESINKSSLDSYPPTLPPP
YEKHPTEPHQPEQYPSEIIEDPTTQRSDQEPEIPDEPPGVPDEPPELPDEPPEIPDEPPE
ILDKPQERPIELPEGREAPQESTENATEGQKEFIETTKETTERSEEPVEKPEEPLEVPEA
PIEIPGEPTGSPKEFTERPDEPTERPEEPIEIPEEPTEILEKQAANPEEPTEKPAEIPEE
SQRFDLTEMPYISRTPVYNTTKYKETNEYKTIIKSSYIPPRPVEEITSEPPIIQPMKITP
FRSPLNKTVINRKQEVIKESHVYIDSDFQQVPYTTIPPFYSVPSIRGEPGPQGEPGKPGQ
YGERGVPGTPGVPGMPGIPGPTPDVSTYYQQLAQVHGNLDKGPINSGYPPEAFHTMQAQV
GPVGTRGPPGLPGPPGPQGFQGPRGETGDGGAPGPAGPVGPRGIPGLPGRDGERGHDAEP
GQPGTIGPAGPRGLPGMPGIPGMKGHIGFPGIDGAKGEQGAIGEKGSIGSPGQPGITGSV
GPIGARGERGREGPPGPPGIRGADGLHGAIGPPGNIGKAGPPGFPGSVGAKGDVGLPGPK
GSFGLQGPRGESGKSGESGEPGIPGTPGKDGNQGEKGSPGASGPIGPSGFPGPRGAPGET
GSVGPPGIKGADGLNGERGYKGEAGIKGETGAPGPRGLPGIDGPEGKRGRKGSEGPRGLP
GIQGERGIPGERGLPGPDGSPGTKGSLGDRGLEGPPGSKGAVGDTGRPGMTGLQGLSGSI
GKPGPPGKSGPPGERGIPGADGKVGEPGPPGLQGLPGPIGPPGDKGLTGVTGAAGEVGPP
GAPGPRGDSGKEGPPGNAGIPGKPGLDGERGAVGPPGSIGSQGVPGVPGNPGQPGKDGEQ
GQQGPAGKHGEAGTRGERGFPGERGPIGHSGLQGVKGEPGVAGPDGPTGLQGIRGDKGHS
GSPGLMGIPGLRGEQGLPGLKGERGSTGTQGPSGSPGPAGERGPQGFVGPIGPPGEPAER
GEPGSTGPPGEPGAPGTPGERGSFGPQGVQGFPGSPGSVGMPGLKGDRGDTGMKGDQGNT
GPMGKMGESGLPGAMGLIGPKGSRGDQGNKGDMGLMGIPGRVGERGPMGYPGSTGPPGPP
GLVGAKGWQGEPGKQGVPGNVGAPGLRGLDGPKGETGADGASGPVGPIGPQGAVGERGLT
GVPGSQGPMGMRGTQGLPGDKGSPGKPGSDGSQGVQGLAGPPGSPGPQGERGQDGATGLP
GAPGISGRPGDKGPPGSPGNLGSPGSPGMIGPQGLPGPTGNPGERGLRGENGPQGVEGPP
GQRGKAGPPGVQGEKGDKGDIGPEGMKGHKGLMGLQGLPGAPGADGQKGNNGYPGPPGPV
GEPGPKGPPGQDGSPGLPGLMGQPGPRGLTGERGPDGIPGASGLPGPPGPPGEALAYDMA
ALTALLTQGHSKGPNDGTHQDQPDKMSETERRELIFTAYKKLKTSFEKFKKPNGEKDNPA
KTCKDLYAAYPDLESGEYWVDPNEGDVRDAVLVRCDQITKSTCVKPQPDHIGPIDFENRN
PQPEIWLSEFGYTGQISYKADSNQISFLQLLSESASQNLTYHCKKSIGYFDAENRSYKKG
LKLVGFNDVDITPRGNPKMKYTAIEDECKTRSQEWKKTTISYTTDRPSRLPIVDVVLRDF
NEIGQSFSIHLSPVCFV
NT seq
5274 nt
NT seq
+upstream
nt +downstream
nt
atgcacggcccgagtagcacagtggcctgcgcgctgtggttgacatgcgtagcgctactt
ctggcggccgaaggggccgctccgggggcccgccgtcacgatagacgcgtccggccaggg
tcggcggtggccgcggaccggtccgccaacgacgccgccggcgccgcgatggacgtcgac
gactacgaccgcgacaactacgacgaagactacgaagacagcggagattcccaaaagcgg
ccgccaccaccgccgccgccgccaccaccgccgaaaacgtctgcgtcactcacccccgac
caccgtgaatctataaacaaatcttcattggactcttatcccccaactttaccaccacct
tacgaaaaacaccccacagaacctcaccagccagagcagtacccaagtgaaataatagaa
gatccaactactcaacgatctgatcaagaaccagaaataccagatgaaccaccaggagta
ccagatgaaccaccagaattaccagatgaaccaccagaaataccagatgaaccaccagaa
atattggacaaaccccaagaaagaccaatagaactaccagaaggacgagaagcacctcaa
gaaagtacagaaaatgctacggagggacaaaaagagttcatagaaacaacaaaagaaact
acagaaaggtcggaggaacccgtagaaaagccagaagagcccttggaagtacctgaagcc
cccatagaaataccaggagaacctacaggaagtccaaaagagttcacagaaaggccagat
gaaccaacagaaaggccagaagagcccatagaaataccagaagaacccactgaaatccta
gaaaaacaagctgcaaatccagaagaacccaccgaaaaacctgcagaaataccagaagag
tctcaaagatttgatttaactgaaatgccgtatatatctagaacaccagtatataataca
acgaaatataaagagactaatgagtataaaacaataattaagagttcatatattccacca
cgacctgtagaagaaattactagtgaaccaccaattatacaaccaatgaaaattacacca
tttagatcaccactaaataaaaccgtcataaaccgaaaacaagaagttatcaaagaatct
catgtttacatagacagtgatttccaacaagtaccatatacaacaataccaccattctat
tcagttccatctattcgaggagaaccaggtcctcaaggcgaaccaggaaaacctggacaa
tatggtgaacgaggtgttccaggtacaccgggagtcccaggaatgcctggaattcccgga
ccaactccggatgttagcacatattaccagcaattagctcaagttcacggaaatctagat
aaaggccctataaatagcggttatccaccagaagcatttcatactatgcaagcacaagtt
ggcccagttggaacgagaggacctcccggtcttcctggacctcctggaccccaaggattc
caaggacctcgtggagaaactggtgatggtggtgcgccaggccctgctggcccagttggt
cctagaggtattcctggactacccggtagagatggtgaacgaggccatgatgcagaacca
ggacaaccaggtactattggtcctgctggacctagaggtttacctggaatgccaggcata
ccaggaatgaagggtcacataggattccctggcatcgacggagcaaaaggtgaacaagga
gcaatcggcgaaaagggatctattgggtctcctggtcaacccggtattactggttcagta
ggtcctattggtgcacgaggagaaagaggcagagaaggaccacctggaccaccaggaatt
cgaggtgctgatggtttacacggagctattggtcctccaggaaatattggaaaagctggt
ccaccagggtttccgggttcagttggtgcaaaaggagatgtaggattaccaggacctaag
ggtagttttggtttgcaaggaccaagaggggaatctggaaaatctggcgaatcaggtgaa
ccaggtattccaggaacaccaggaaaagatggtaatcaaggagaaaagggcagtccagga
gctagtggacccattggtccatctgggtttccaggacctcgaggcgctccaggagaaacg
ggtagtgtcggacctcctggcataaaaggagctgatggattaaatggcgagcgtggttat
aaaggagaagcaggaataaagggtgaaactggagctcctggcccaagaggattacctggc
attgatgggccggaaggaaaacgaggcagaaaaggttctgaaggtcctcgaggactcccc
ggtattcaaggcgaacgcggtattcccggtgaacgtggattacccggtccagacggatca
ccaggcaccaagggatcacttggtgatcgaggattagaagggcctcccggttcaaaaggt
gctgttggtgatactggacgaccaggcatgacaggtcttcaaggtttgagtggatctata
ggtaaaccaggacctccaggaaagtctggaccaccaggcgaacgtggtatacctggtgca
gatggaaaggttggagaaccaggaccaccaggtctgcaaggtttaccaggaccaataggt
ccaccaggtgataaaggtttaactggagtaacaggagcagctggtgaagtcggaccccct
ggtgcaccaggtcccagaggtgattcaggaaaagaaggacctccagggaatgctggtata
cctggtaagccagggttggacggggaaagaggagcagttggtccaccgggatccattggt
tctcaaggtgtacctggggtacctgggaacccgggtcagcctggtaaagacggcgaacaa
ggtcaacaaggaccagcaggaaaacatggcgaagcaggaactagaggcgaacgtggattt
cctggtgagagaggccctattggtcattcaggacttcaaggagttaaaggtgaaccagga
gttgctggtcctgatgggccaactggattacaaggtattagaggtgacaaaggacattca
ggatcaccaggtttaatgggtataccagggttgagaggtgaacaaggactacctggtttg
aaaggagaacgaggttctactggaacgcaaggaccatccggttcaccgggtcctgctggc
gaaagaggacctcaaggatttgttggtccaattggtccacctggtgaaccagccgaacga
ggcgagcccggatctacaggacctccaggagagcccggcgctccaggcacacctggcgag
agagggtcatttggacctcaaggtgttcaaggttttcctgggtcaccagggtcagtaggc
atgccaggtctaaaaggcgatagaggagacacaggtatgaaaggagaccaaggaaatacc
ggaccaatgggaaaaatgggagaatctggtcttcctggtgccatgggtttaattggtcca
aaaggtagtcgtggagatcaaggtaataaaggagatatgggattaatgggaataccaggc
agagttggagaacgaggaccaatgggatatcctgggtcgacaggacctccaggacctcca
ggtttggttggagcaaaaggatggcaaggtgaaccgggaaaacagggtgtgccaggaaat
gttggggcaccaggtttacgcggattagatggccccaaaggtgaaactggtgcagatgga
gcttcaggaccagtaggaccaattggtccacagggagccgtaggagaaaggggactgaca
ggagttccaggcagtcaaggaccaatgggaatgcgaggaacacaaggtctaccaggtgac
aaaggatctccaggaaaaccaggatcagatggttcacagggagttcaaggtttagctggt
cctccaggttctccaggacctcaaggtgaaagaggtcaagatggagctactggtttacct
ggagccccgggaatcagcggaaggccaggagataaaggcccacctggatcacctggcaat
ctaggtagtccaggttcaccaggaatgattggtccacaaggcttacctggtccaactgga
aatccgggtgaacgaggtttacgcggtgaaaatggtccacaaggtgtagaaggccctcct
ggccaaagaggtaaagcaggacctcccggagttcaaggagaaaagggagataaaggagac
ataggccctgaaggaatgaaaggtcataagggcttaatgggcttacaaggactaccaggt
gccccaggtgctgatggtcaaaagggtaataatgggtatcccggaccacctggaccagtt
ggtgaaccaggaccaaaaggaccccccggacaagatggaagtcctggattaccaggttta
atgggacaaccgggtcctaggggattaactggcgaacgaggtcctgacggaataccagga
gcatctggtttacctggaccacctggacctccaggtgaagcattggcatatgacatggct
gcactaacagctttattaacacaaggacatagcaagggaccaaatgatggtacgcatcaa
gatcaacctgacaaaatgtcagaaacagagagacgcgaattaatattcactgcatataaa
aaattgaaaacgtcatttgagaagtttaagaaaccaaacggtgaaaaagataacccagcc
aagacatgtaaagatctatatgctgcttatcccgatcttgaaagcggagaatattgggtg
gatcccaatgaaggagatgttcgtgacgcggtactcgtacgatgcgatcagattacaaag
agcacatgtgtaaaacctcaaccagatcatataggtccaatagattttgaaaatagaaat
cctcaaccagaaatttggttatctgaatttggatatactggacagatatcatacaaagct
gatagcaatcaaattagttttttacaactattgtcagaatcagctagtcagaatttaaca
taccactgtaaaaaatcgattggctattttgatgctgaaaacagatcatacaaaaaagga
ttgaaattagttggctttaatgatgttgatattactccaagagggaatccaaaaatgaaa
tacactgctatagaagatgaatgcaagactcggtcgcaagaatggaaaaaaactacaatt
tcgtatacaactgatcggccatctcgcttaccaatcgtagatgttgttctacgagacttt
aatgaaattggtcaaagttttagcatacatttgagtccagtgtgttttgtataa
DBGET
integrated database retrieval system
