Acyrthosiphon pisum (pea aphid): 100164480
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Entry
100164480 CDS
T01076
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5 isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100164480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100164480
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100164480
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Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
100164480
NCBI-ProteinID:
XP_001944073
APHIDBASE:
ACYPI005495
UniProt:
A0A8R1W2X7
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Position
A1
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AA seq
232 aa
AA seq
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MALSTTTSQPVQNNVQSSPGTGWPKRTAPVKSSTCPSLNRHINLYPLSNYKFGTKEPLFE
KDPSVPARFQRMRDEFEKIGMRRSVEGVLIVHKHGLPHVLLLQLGTTFFKLPGGELNPAE
DEVEGLKRLLTETLGRQDGVQPEWTVEDTIGNWWRPNFEPPTYPYIPPHITKPKEHKRLF
LVQLPDKALFAVPKNYKLVAAPLFELFDNAQGYGSIISSLPQALGRFNFIYM
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgagcacaacgaccagccaaccggtacaaaacaacgtccaatcgtcaccagga
accgggtggcctaagcgcacagctccagtcaaatcgtctacgtgcccgtcgctcaacaga
catataaatttgtatcctctatcaaattataaatttggtacaaaagaacctttatttgaa
aaagatccatctgtaccagctagatttcaacgaatgcgtgatgaatttgaaaaaattggt
atgcgccgtagtgttgaaggcgttttaatagttcataaacatgggttgccgcatgtttta
ttattgcagttgggcaccacattttttaaactgccaggtggagaactaaatcctgcagaa
gatgaggtcgaaggacttaaacgattactaactgaaactttaggcagacaagatggtgtt
cagccagaatggactgttgaagataccattggcaattggtggcgacctaactttgaacct
ccaacttatccatatataccaccacacataactaagcccaaggaacataaaagacttttc
ttagttcagctacctgataaagcattgtttgctgtgccgaaaaattacaaattggtggca
gcccctttgtttgagctgtttgataacgctcaaggatatggatctattatttcctcattg
cctcaagcactcggaagattcaacttcatttatatgtaa
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