KEGG   Acyrthosiphon pisum (pea aphid): 100164514
Entry
100164514         CDS       T01076                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03040  Spliceosome
api04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100164514
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    100164514
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:api03041]
    100164514
   04121 Ubiquitin system [BR:api04121]
    100164514
   03400 DNA repair and recombination proteins [BR:api03400]
    100164514
Enzymes [BR:api01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     100164514
Spliceosome [BR:api03041]
 Complex B
  Other components
   Prp19 complex
    100164514
 Complex C
   Prp19-CDC5 complex
    100164514
Ubiquitin system [BR:api04121]
 Ubiquitin ligases (E3)
  U-box type E3
   100164514
DNA repair and recombination proteins [BR:api03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    100164514
SSDB
Motif
Pfam: WD40_Prp19 Beta-prop_WDR5 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_IFT122_1st Beta-prop_EML_2 WD40_WDHD1_1st Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 WD40_Gbeta WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st DSE1_N WD40_MABP1-WDR62_1st Beta-prop_EIPR1 CFAP251_N Beta-prop_NOL10_N Beta-prop_SCAP Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_Vps41 NBCH_WD40 ASA1 U-box Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N WD40_like Beta-prop_DCAF12 PROPPIN zf-Nse Beta-prop_ACSF4 RMC1_N PAS_11
Other DBs
NCBI-GeneID: 100164514
NCBI-ProteinID: XP_003247938
APHIDBASE: ACYPI005525
UniProt: A0A8R1W6Y5
LinkDB
Position
A1
AA seq 513 aa
MSLVCAISNEVPEHPVVSPVSGSIFERRLIEKYIKENNTDPINGEELTVEQLVDIKTASI
VKPKPVTGTSIPAILKMLQDEWDAVMLHAFTQRQQLQTARQELSHALYQHDAACRVIGRL
TKEVTAAREALATLKPQAGISVGDSSANAGPTTIPQPAIAMEAAGVPNQPTEEAGITDDI
IRKLQEKATVLTQERKKRGRTVPEDLMDQESLKGFKTLASHPGLHSASVPGILSLDIHSE
DTSKILTGGNDKNATVFNKDTEQIIAVLKGHTKKVTRVIYHPNEDVVITGSPDTTIRVWN
VGASNSLSQIIRAHEGPVTGVSLHPTGDYVLSTSVDQNWAFSDIRTGKLLTKVSNQTSNN
TLTTGQFHPDGLIFGTGTSDSNVVIWDLKEQSNVATFSGHSGPITAISFSENGYYLATSA
DDCCVKLWDLRKLKNFKTLVMDDGYEIKDLCFDQSGTYLGVAGTDVRVYMCKQWQELKVF
NDHTALATGIRFGKHSQFIASTSMDRTLKLYGI
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtcgttagtgtgtgctatttctaatgaagtgccagagcatcctgtggtatcaccagta
tctggatcaattttcgaaagacgtcttatagaaaaatacatcaaagaaaacaatactgat
cctataaatggtgaagaattaactgttgaacagttagtagacataaaaaccgcctccatc
gttaaacctaaacctgtgactggcactagcattcctgcaatattgaaaatgctccaagat
gaatgggatgcagtgatgttacatgcatttacacaaagacaacaattgcaaactgctaga
caagaattgagtcatgctttgtaccagcatgatgctgcttgtcgtgtgataggccgtttg
actaaggaagtgacagctgcacgtgaggctttggctacactcaaacctcaagccggaatt
tctgttggcgattcatctgcaaatgctggacctactacaataccacaaccagcaattgct
atggaagccgctggagtgccaaatcaacctactgaagaagcaggtataactgatgatatt
attaggaaactacaagaaaaagctacagtcttaacacaagagagaaagaaacgaggacgt
acagttccagaagacttgatggaccaagaatcattaaaaggattcaaaacattggcatct
catccaggtcttcatagtgccagtgtaccaggaatattgtctttagacatacacagtgaa
gatactagtaaaattttaactggaggaaatgataaaaatgctacagtatttaataaggat
actgaacaaataatagctgttctaaaaggtcacacaaagaaggtcacacgagtcatttat
catccaaatgaagatgttgtaataactggatcacctgatacaacaattcgagtatggaat
gttggtgcttctaattccttatctcaaataattagagctcatgaaggtccagtaactgga
gtgtcattgcatccaaccggggattatgttttatctacatctgttgaccagaactgggca
ttttctgatattcgcactggaaaactattaaccaaagtttcaaatcaaacttcaaacaat
actctaactactggacaattccatcctgatggacttatttttggaactggtacttcagat
tcaaatgttgtgatttgggatttgaaagaacaatcaaatgtagcaacattttcaggacat
tctggaccaattacggccatatcattttccgaaaatggttactatcttgctacttcagca
gatgactgttgtgtaaaactttgggatttacgtaaattaaaaaactttaaaactctcgtc
atggatgatggatatgagatcaaagacttatgttttgaccaaagtggaacttatctgggt
gttgcaggaactgatgttcgtgtttatatgtgtaagcaatggcaagaattgaaagtcttc
aacgatcacacagcattggctacaggaattagatttggaaaacattctcaattcattgct
tctactagtatggacagaacactgaaactttatggaatttaa

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