Acyrthosiphon pisum (pea aphid): 100165189
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Entry
100165189 CDS
T01076
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03030
DNA replication
api03420
Nucleotide excision repair
api03430
Mismatch repair
api03440
Homologous recombination
api03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100165189
03420 Nucleotide excision repair
100165189
03430 Mismatch repair
100165189
03440 Homologous recombination
100165189
03460 Fanconi anemia pathway
100165189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
api03000
]
100165189
03032 DNA replication proteins [BR:
api03032
]
100165189
03400 DNA repair and recombination proteins [BR:
api03400
]
100165189
Transcription factors [BR:
api03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
100165189
DNA replication proteins [BR:
api03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
100165189
DNA repair and recombination proteins [BR:
api03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
100165189
MMR (mismatch excision repair)
100165189
DSBR (double strand breaks repair)
HR (homologous recombination)
100165189
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
CDC24_OB3
GDH2_N
Motif
Other DBs
NCBI-GeneID:
100165189
NCBI-ProteinID:
XP_001951063
APHIDBASE:
ACYPI006150
UniProt:
A0A8R2AE53
LinkDB
All DBs
Position
A1:98584638..98588205
Genome browser
AA seq
609 aa
AA seq
DB search
MEYEKMLTKGALKSIMNNEDVKDPVMQVLGVRKITAAGANERYRLLISDGHNLNSFAMLA
TQLNGMVSSGEINEFSILQIKRHIISSLTDRSKGSKQVMILIDLAVMVPGDVVGSKIGDP
KPIIDNSGQIVENGASASVDSTPQSNSLAKSHSVQSSVINNGLQRDIDVSNIHPINSLSP
YQNKWTIRARVVNKAPVRTWNNQRGEGKLFSMDLLDESGEIRATAFNSECDKFFDMIEVN
KVYFITRGAIKTANKKFSNLNNDYELTLSGETQIFPCHDFDDSQMPALKFNFVPLSQVKD
VDVDGIVDVIGVCQTAGELTMLMSKTTRKELKKRDVTIVDQSLSSVTITLWDTQAEDFDG
SLQPVIAIKGSRIREFMGSKSLSLLGSTVMQINPDIDEAHRLRGWYDSLPSNAEFTSISA
RSDVGANNQFLTIKGAQLAQLGSGDKADYYSMYSHLIFVKSESALYKACPKPDCQKKVID
RNDGTYRCEKCNDETENFKYRLMLSAQLSDSTGNQWVTMFQETAESLLGTTSAELGRLME
ESKEEYSDVFQNQMFKLFDIRARAKMETYNNETRLKVTLFSIKPIDYKVASTKLIATIKR
LSGITTSVM
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgaaaaaatgttaacaaagggtgcgttaaagtcgatcatgaacaatgaagat
gttaaagatccagtcatgcaagttcttggtgtaaggaaaattactgctgcaggagcaaat
gaaagatatcgcttacttatttctgatggccataatttaaattcttttgccatgttggct
actcagttgaatggcatggtttcttcaggagaaattaatgaattttccatcctacagata
aaacgtcatataatcagtagcttgactgaccgttcaaaaggaagtaagcaagttatgatc
cttatagatttagcagttatggtacctggtgatgtagtgggttcaaaaattggtgatcct
aaaccaataattgataattctggtcaaatagtggaaaatggcgcttctgcttcagttgat
tctacaccccagtctaattctttggccaaatcacattctgtccaatcaagtgttataaat
aatggtcttcagcgagatattgatgttagcaatattcatcctattaattctctaagccca
tatcaaaataaatggacaatcagagctagagttgtaaacaaagctccagttcgtacttgg
aataatcaaagaggcgaaggtaaactttttagcatggatttacttgatgagagtggcgag
attcgtgcaactgcctttaatagtgaatgtgacaaattctttgatatgattgaagtaaat
aaagtatactttataactcgcggcgcaattaaaacagcaaataaaaagttttcaaatctg
aataatgattacgagcttactctttctggtgaaacacaaatatttccatgtcacgacttt
gatgattctcaaatgcccgctctgaaatttaattttgttccattgagtcaagtgaaagac
gttgatgttgatggtatagtagatgtcataggagtttgtcaaactgcaggagaattaact
atgttaatgtcgaagactacaagaaaggaattaaaaaaaagagatgtgactatagtcgac
cagtctttgagttcagtgactattactttgtgggatactcaagcagaagattttgatgga
tcattgcaacctgtaattgctataaaaggaagcagaatcagagaattcatgggtagcaaa
tcattgtcacttttaggatcaactgtaatgcaaataaatccagacatagacgaagcacat
cgcttaaggggttggtatgattcacttccttcaaatgcagaattcactagtatttcagct
cgttctgatgttggagctaataatcaatttcttacaattaaaggagcccaacttgctcaa
cttggtagcggggataaagctgattattatagtatgtactcacatttgatttttgtgaaa
tccgaatctgccctgtataaagcgtgtccaaaaccagattgtcaaaaaaaagttatcgat
cgaaatgacggaacatatcgttgtgaaaagtgtaatgatgaaacagaaaatttcaagtat
agattgatgctctcggcacaattgagtgactcgactggaaaccagtgggtaaccatgttt
caggaaaccgctgaaagtcttttgggaactactagtgcggaattgggaaggttgatggaa
gagtctaaggaagaatatagtgatgtttttcaaaatcaaatgtttaaattgtttgatatt
agagctagagcaaaaatggagacatacaacaatgagactaggttaaaagtaacattattc
agtataaaaccaattgattataaggtagcttctacaaaattgattgctaccattaaaaga
ttgagtggtattacaacatcggttatgtaa
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