Acyrthosiphon pisum (pea aphid): 100165216
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Entry
100165216 CDS
T01076
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03013
Nucleocytoplasmic transport
api03015
mRNA surveillance pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100165216
09122 Translation
03013 Nucleocytoplasmic transport
100165216
03015 mRNA surveillance pathway
100165216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100165216
03041 Spliceosome [BR:
api03041
]
100165216
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100165216
TREX complex
100165216
Spliceosome [BR:
api03041
]
Complex C
Other components
EJC/TREX
100165216
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100165216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
100165216
NCBI-ProteinID:
NP_001155655
APHIDBASE:
ACYPI006176
UniProt:
C4WSF5
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All DBs
Position
A1:complement(17467641..17472671)
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AA seq
265 aa
AA seq
DB search
MDLSLDELIKSKRSTSRGGRRGGGRQGGSRGGGVKRGGGGGGGSNFRSNGAGGGGGGPIR
RGRPMARRSNGFSPYSKGDVNGSWTHDMYEGPKRQQMRGGLSTTNIHKIVISNLDFGVTS
TDIQELFDEFGPLKTATVHYDRSGRSLGTADVVFDSKNAALKAVRQYNNVPLDGRPMKIE
LATDLSTVANLATRLSRPAQLPVRGTRGGVRGNRGNTRGGRGNIRGNSRGRGGGSSRGGR
NNEKKMPNKDELDAQLDSFIKSKNN
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggacttgagcttagacgaacttatcaagagcaaacggtcaacgtctcgcggcggacgt
cgtggtggcggaagacaaggcggttctagaggcggcggtgtcaaacgcggaggcggtggt
ggcggaggatcgaatttccgatcaaatggtgctggtggcggtggcggtggccctatccgt
agaggcagaccgatggccaggcgttcaaatggatttagtccttattccaagggtgatgtg
aatggatcgtggactcatgatatgtacgaaggacctaaaagacaacaaatgaggggtggt
ctatcgactaccaatattcataagatagtcatatcaaatttggattttggggttacatca
acagatatacaggaactttttgatgaatttgggcctttaaaaactgctacagttcactat
gatagatcaggaaggtctttaggtacagctgatgtcgtttttgatagtaagaatgctgcg
ttaaaagcagttcgtcaatataacaacgttcccctggatggtcgtcccatgaagatagaa
cttgctacagacttatctactgttgctaatcttgctacacgtctgagtagaccagcccaa
ttaccagtccggggtactcgtggtggagttagaggtaaccgaggtaacactagaggcggt
cgtggtaacattcgaggcaacagcaggggacgaggtgggggcagtagcagaggtggcagg
aataatgaaaaaaagatgccaaataaagatgaactagatgcacaacttgatagctttatc
aaaagcaagaataactga
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