KEGG   Acyrthosiphon pisum (pea aphid): 100165216
Entry
100165216         CDS       T01076                                 
Name
(RefSeq) THO complex subunit 4
  KO
K12881  THO complex subunit 4
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03013  Nucleocytoplasmic transport
api03015  mRNA surveillance pathway
api03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100165216
  09122 Translation
   03013 Nucleocytoplasmic transport
    100165216
   03015 mRNA surveillance pathway
    100165216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100165216
   03041 Spliceosome [BR:api03041]
    100165216
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     100165216
    TREX complex
     100165216
Spliceosome [BR:api03041]
 Complex C
  Other components
   EJC/TREX
    100165216
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100165216
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 100165216
NCBI-ProteinID: NP_001155655
APHIDBASE: ACYPI006176
UniProt: C4WSF5
LinkDB
Position
A1:complement(17467641..17472671)
AA seq 265 aa
MDLSLDELIKSKRSTSRGGRRGGGRQGGSRGGGVKRGGGGGGGSNFRSNGAGGGGGGPIR
RGRPMARRSNGFSPYSKGDVNGSWTHDMYEGPKRQQMRGGLSTTNIHKIVISNLDFGVTS
TDIQELFDEFGPLKTATVHYDRSGRSLGTADVVFDSKNAALKAVRQYNNVPLDGRPMKIE
LATDLSTVANLATRLSRPAQLPVRGTRGGVRGNRGNTRGGRGNIRGNSRGRGGGSSRGGR
NNEKKMPNKDELDAQLDSFIKSKNN
NT seq 798 nt   +upstreamnt  +downstreamnt
atggacttgagcttagacgaacttatcaagagcaaacggtcaacgtctcgcggcggacgt
cgtggtggcggaagacaaggcggttctagaggcggcggtgtcaaacgcggaggcggtggt
ggcggaggatcgaatttccgatcaaatggtgctggtggcggtggcggtggccctatccgt
agaggcagaccgatggccaggcgttcaaatggatttagtccttattccaagggtgatgtg
aatggatcgtggactcatgatatgtacgaaggacctaaaagacaacaaatgaggggtggt
ctatcgactaccaatattcataagatagtcatatcaaatttggattttggggttacatca
acagatatacaggaactttttgatgaatttgggcctttaaaaactgctacagttcactat
gatagatcaggaaggtctttaggtacagctgatgtcgtttttgatagtaagaatgctgcg
ttaaaagcagttcgtcaatataacaacgttcccctggatggtcgtcccatgaagatagaa
cttgctacagacttatctactgttgctaatcttgctacacgtctgagtagaccagcccaa
ttaccagtccggggtactcgtggtggagttagaggtaaccgaggtaacactagaggcggt
cgtggtaacattcgaggcaacagcaggggacgaggtgggggcagtagcagaggtggcagg
aataatgaaaaaaagatgccaaataaagatgaactagatgcacaacttgatagctttatc
aaaagcaagaataactga

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