Acyrthosiphon pisum (pea aphid): 100165234
Help
Entry
100165234 CDS
T01076
Name
(RefSeq) putative transcription factor SOX-15
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
api03000
]
100165234
Transcription factors [BR:
api03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
100165234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
TMEM51
Motif
Other DBs
NCBI-GeneID:
100165234
NCBI-ProteinID:
XP_001952542
APHIDBASE:
ACYPI006194
UniProt:
A0A8R2A8M5
LinkDB
All DBs
Position
A2:complement(49929346..50017779)
Genome browser
AA seq
881 aa
AA seq
DB search
MSSSSGVADPEPDTMIQDNVAAAYAPSGYSITEDFKLQAHGLDSPHHQGLYGGLGHSPTS
GSPCSVYAYQPYHRNYGAGQFHQSTAAEIQQQQQQIPVSQMVVPPSLSAQKSSDDAAAAC
WLQHNGGGSAFEHHLHHQQQLSSAYQSHHQQRQQDNNGLTGGSQQQQQQQQQQTAKMTQQ
QQQKAVKEQRIRRPMNAFMVWAKVERKKLADENPDLHNADLSKMLGKKWRSLTPQDRRPY
VEEAERLRVIHMQEHPNYKYRPRRRKHNKQRAGSPTSVVGVSAAVAQGGSAHSPTSRRPN
SAGQIKLVQYPSSSPYQSSSSYSSPAIHQQQPYAYQPYSPSKTTSPYYPNSESPYSPVRV
SEVITPESSPTCSPDPDKPTGPATATDETGGGGGQAPDGGLLQQRSASKTPTLPTPELSP
MEPATGAGKDPHHHSHHHQHHGHQHLHHPYHRTDVVKYELDDFGGYYGGGGGQKQLNNNN
NHHRQFNNNNIQTSSYQPAPGSIAAMGVAKGMVMMCTNQRLAYEHNNIVTGTFYPPIATS
QDQQVLGPNSQHHQQQQQQQQQQQQQQQQQPHYANRPFYSTSGLQAAGTAVYTSGLSSAA
TIAAGRPPSDGYHVAGSILQQQQEDHHHNLQGLQQHRQQSTGNDYHGGGGGTGRGGGEII
EMSFDHHQSPSEMLLANLQRPRSQQSDITVDASSSAGGGSELDRYLKYMAQQPDNNHNYQ
QQQQHNVMFAGIQQSHHQQQQQQQQQQHHHHHLQQQQQQQHQQHQQQQQQQQYSSYYAPA
VVQHIVHQDVHHHHQQHHSPSYLLNNCGIKSEFGGYATLDGLPPQHYPDVQNVPATANMQ
SVAAAAAAAAAGQVLAASGGGKPDEEFSVILADVRKTCYSS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcttcgtctggtgtcgccgatcccgaaccggacactatgatacaggacaacgtc
gccgcggcgtacgcgccgtccggttactcgataaccgaagactttaagttacaagcccat
ggtctagactctccgcaccaccaggggttgtacgggggcctaggtcactcgcccacttcc
ggttcgccttgttccgtgtacgcttaccagccataccaccgaaattacggcgctggccag
ttccatcagtcgacggccgccgaaatccaacagcagcagcagcagataccagtgtcccaa
atggtggtaccaccttctctatcggcgcaaaagtcttcggacgacgcggccgccgcttgt
tggctacagcataatggcggagggtcggctttcgaacatcacctgcaccaccaacagcag
ctgtcatcggcgtaccagtcgcatcaccagcagcggcagcaggataacaacggcttgact
ggaggtagccaacagcagcagcagcagcagcagcaacagacggccaagatgacgcagcaa
cagcaacagaaggcggtcaaggagcagcggatccggagacccatgaacgcgttcatggta
tgggccaaggtggagcggaaaaaattggctgacgaaaatcccgacttgcacaacgctgac
ctcagcaagatgctcggaaaaaaatggcgaagtctgacaccacaagaccgtcggccgtac
gtggaagaagctgaacggctgcgggtgatccacatgcaagaacaccccaactacaagtat
aggcccaggcgcaggaagcacaacaagcagcgggcgggctcgccgacttctgtggtcggc
gtgtcggcggccgtggcgcagggtggctccgcacactcgcccacgtcccggcgcccaaac
tcggcgggccaaatcaagctggtccagtacccgtccagctcgccgtaccagagctcgtcg
tcgtactcgtcaccggctatccaccagcagcagccgtacgcgtaccagccgtacagcccg
tccaagacgacgtcgccgtactacccgaacagcgagagcccatactcgcctgtccgcgta
tccgaagtcattactcctgagtcttcgcccacgtgcagccccgatccggacaaacccacc
ggtcccgccacggccaccgacgaaactggcggcggtggcggacaggccccagacggtgga
ctgctgcagcagcggtcggccagcaagacgcccacgcttcccacgcccgagctgtcgccc
atggaaccggccacgggcgcaggcaaagacccgcaccaccactcacaccaccatcaacac
cacggccaccaacacttgcaccacccctatcatcggaccgacgtcgtcaagtacgaactc
gacgactttggcggctattacggcggcggtggtggacagaaacagctaaacaataataac
aaccaccaccgacaattcaacaacaataatattcagacgtcgtcttatcaaccggctccc
ggttcgatagcggccatgggtgtggccaagggcatggtgatgatgtgcaccaatcagcga
ttggcgtacgagcacaacaacatcgtaaccggtacgttttaccctccgatagccacatcc
caagaccaacaggttctgggacccaattcacaacaccaccaacaacagcaacaacaacaa
cagcaacaacagcagcagcagcagcagcagccgcattacgccaacaggccgttctattcg
acaagcggacttcaagccgccggcaccgccgtttatacgagcggcctctcgtcggcagcg
accatcgcagccggcagacctccatccgatggataccacgttgccggaagtatactgcaa
cagcagcaagaagaccaccaccacaacttacagggcttgcaacagcacaggcaacagtcg
acgggcaatgactaccatggaggtggtggcggaacgggcagaggtgggggtgaaatcatc
gagatgagcttcgaccatcaccaatcgccgtcagaaatgctattggccaaccttcagcgg
cccagatctcagcaatccgacatcacggtggatgcgtcgtcatctgccggaggtggctcc
gaacttgaccggtacttaaagtacatggcccaacagccggacaacaatcacaactatcag
caacagcagcaacacaacgttatgtttgccggcatacaacaatcgcaccaccaacaacaa
caacaacaacaacaacaacaacaccaccaccaccatctacagcaacagcagcagcaacaa
caccagcagcatcagcaacagcaacagcagcaacagtacagctcttactatgcgccggca
gtggtgcaacacatcgtgcaccaggacgtccaccatcaccaccaacagcaccacagtccg
tcgtatcttctcaacaactgcggtataaaaagcgaatttggcggttacgcgaccctggac
ggcctaccgccccaacattatcccgacgtgcagaacgtcccggccacggccaatatgcag
agcgtggccgcggccgcggcagccgctgcagcgggacaggtgttggccgctagcggtggt
ggaaaaccggacgaggagttcagcgtcatacttgcggacgtccgaaagacttgctacagc
agttga
DBGET
integrated database retrieval system
