Acyrthosiphon pisum (pea aphid): 100165311
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Entry
100165311 CDS
T01076
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03082
ATP-dependent chromatin remodeling
api03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100165311
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100165311
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
api01009
]
100165311
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100165311
03036 Chromosome and associated proteins [BR:
api03036
]
100165311
Protein phosphatases and associated proteins [BR:
api01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100165311
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100165311
SWI/SNF complex
100165311
Chromosome and associated proteins [BR:
api03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100165311
PBAF complex
100165311
SWI/SNF complex
100165311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
Motif
Other DBs
NCBI-GeneID:
100165311
NCBI-ProteinID:
XP_001944745
APHIDBASE:
ACYPI006268
UniProt:
A0A8R2A2I1
LinkDB
All DBs
Position
A1:complement(82403209..82409742)
Genome browser
AA seq
375 aa
AA seq
DB search
MALRTYGDKPISFQVEENGEYYCIGSEVGNYLRLFRGSLYKRYPGMFRRTITNDERKRLI
DLGLSAHCLASSVSLLRASEVEDIIDGNDERYKAVSVTSTEPLITRESKGKKSVPWVPSL
PNSSHLDAVPQATPINRNRIIQKKVRTFPLCYDDTDPANIHENANFSELLVPIRLDMEIE
GQKLRDTFTWNKNESLITPEQFAEVLCDDLDLNPLPFVPAIAQSIRQQIEAFTNDNILDE
QHDQRVIIKLNIHVGNTSLVDQVEWDMGEKDNSPEQFAMKLCAELGLGGEFVTAIAYSIR
GQLSWHQRTYAFSEAPLSVVETPFRPPSDADQWSPFLETLTDAEMEKKIRDQDRNTRRMR
RLANTTPGCKLTRLP
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atggcactcaggacgtacggtgacaagccgatcagtttccaagtggaagaaaatggcgaa
tattactgcattggatccgaggtcggcaattacttgcgactgttccgtggttctttgtac
aaacggtatccgggcatgtttcgcaggaccattacgaacgatgagaggaaacgtttaatt
gatttgggtttaagtgctcattgcctggcctctagtgtgtcactattaagagcatctgaa
gttgaagatattattgatggtaatgatgaacgttacaaagctgtatcggtaacatcaact
gaaccattaattacaagagaatctaaaggaaaaaaatcagttccatgggttccatcatta
ccaaacagttcacatttggacgctgttcctcaggctacacccatcaaccgtaatagaatt
attcaaaaaaaagtcaggacgttcccattatgttatgatgatactgatccggcaaacatt
cacgagaatgctaacttttctgaattgttggttccaatcagactcgatatggaaattgaa
ggacaaaaattgagagatacatttacttggaacaaaaatgaaagtttaataactccagag
cagtttgctgaagtgctatgtgacgacttagatttaaaccctttgccatttgtaccagcc
attgcacaatctatacgtcagcaaattgaagcatttactaatgataatattttagatgaa
caacatgaccaaagagttattatcaagttaaacattcatgtaggtaatacatcattagtg
gatcaagttgaatgggacatgggcgaaaaagataattcgcctgaacagtttgccatgaaa
ctatgtgctgaactagggcttggcggagaatttgtaactgccattgcatactccatcaga
gggcagttgagctggcatcagcgtacctatgctttcagtgaggccccactgtcagtcgtt
gagactccatttagaccaccatcagatgccgaccaatggagtccatttctggagactttg
acagacgcagaaatggaaaagaagattagagatcaagacaggaatactaggcgaatgcga
cgactggccaacaccacaccaggatgtaagttaactcgcctaccgtga
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