Acyrthosiphon pisum (pea aphid): 100165419
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Entry
100165419 CDS
T01076
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
api03009
]
100165419
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100165419
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
Pre-60S particles
Helicases
100165419
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
100165419
NCBI-ProteinID:
XP_001949864
APHIDBASE:
ACYPI006371
UniProt:
A0A8R1W261
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Position
A3:31698353..31704168
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AA seq
608 aa
AA seq
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MSLAPSLKWESLNLSEPVLKTIKEHFKFKCMTPIQVESIKNFLEKKKDVAAEAVTGSGKT
LAFLVPMLELILKRSDPLKKHEVGGLIISPTRELATQTSHVLAEFLKNIEGVTQMLTLGG
SPIETDVKAFNKNGANILVATPGRLEDLLTRKIPNFHLHKSLKSLEMLVLDEADKLLELG
FEKSINTVLQYLPTQRRTGLFSATQTKQVAMLVKAGLRNPIMVIVKEKHCLNPKSNQIES
ISTPLALQNYYTICDADKKLAFLVTFLKKNGLNSKYMLFLSTCACVEYFSIILRSLIPEI
NLFSLHGKMNNKRYRIFELFWKAERGILICTDVMARGVDIPEVNWVIQYDPPNNASSFVH
RAGRTARVGKSGSSLVMLMPNEDAYIHFIYSNQKVILELMPELEIENLDLVVEKVRKRQL
KDRTIFDKANRAFVSYIQAYSKHECHLLLRIKDLEFGKLATGFGLLRLPKMPELKNKNTS
DFIPVDMDFNSIKYQNNEREESRQKKLQNYMETGVWLGQMKHKKGLKQTVAWAEAKQKKL
ERREKRKKKKELRKQMELEGKAKAKKKREQAFSQEDLNDLAKDIALMKKLKNKKISKEQF
DMEFGEDV
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagcaccatcattgaaatgggaatctttaaatctgtccgaacctgttctaaaa
acaatcaaagaacacttcaaatttaaatgcatgacaccgatacaggtcgaatctataaag
aattttttagaaaaaaaaaaagatgtcgctgcagaagcagtcaccggtagcgggaaaaca
ttggcatttttagtgccaatgcttgaattgattttaaaacgcagcgatcctttgaaaaaa
catgaagtgggaggccttataatatctcctactcgagaattggctactcaaactagtcat
gtattggctgaatttttaaagaatatagaaggtgttacacagatgctaactttaggcggc
agtccaatagaaactgatgtcaaagcatttaataaaaatggagcaaatattcttgtggcc
actcctggacgattggaagatttattaactagaaagatacccaattttcatttacacaaa
tcacttaaatcgttggaaatgctggtgttagatgaagctgataagctgttagaattaggt
tttgaaaagtctataaatactgttttacaatatttgcctacacaaagaagaacagggttg
ttttcagccactcaaaccaaacaggtagcaatgcttgttaaggcaggactcagaaatcct
atcatggttattgtcaaggaaaaacattgtttgaacccaaaaagcaatcaaattgaatct
atatctacacctttagcattacaaaattattatacaatatgtgatgctgataaaaagcta
gcatttttagtgacatttttaaaaaaaaatggattaaattcaaaatatatgttgttttta
tcaacgtgtgcctgtgttgaatacttttcaataattttaagaagtttgattcctgaaata
aatttattcagcttacacgggaaaatgaataacaaacgttacagaatatttgaattattt
tggaaagctgaaagaggtattttgatatgtacggatgtaatggcccgtggtgttgatata
ccagaagtgaattgggtgattcaatatgatcctcctaataatgcatcttcttttgtacat
cgtgctggtcgaacagctcgtgtaggtaaaagtggatcttccttagtcatgttaatgcct
aatgaagatgcttacatacattttatttattcaaatcaaaaggtaatattggaattaatg
cctgaattagaaattgaaaatttggatcttgtagtagaaaaagttagaaagcgtcaactc
aaagatagaacaatatttgataaagctaatagagcatttgtatcttacattcaagcttat
tcaaaacatgaatgtcatttactattacgtataaaagatttggaatttggtaagcttgca
actggttttggtcttttaagactcccaaaaatgccagaattaaaaaataagaatactagt
gattttattcctgttgatatggatttcaattctattaaataccaaaataatgaaagagaa
gagtcccggcaaaaaaagttacaaaattacatggaaactggagtttggcttggtcaaatg
aaacataaaaaagggttaaaacaaactgttgcatgggctgaggccaaacagaaaaaactc
gaaagaagagaaaaacgtaaaaagaaaaaagaattacgaaaacaaatggagttagaagga
aaagctaaggcaaaaaagaaaagagaacaagccttcagtcaagaagatttgaacgattta
gctaaagatattgccttaatgaaaaaattaaaaaataaaaagatatctaaagaacaattt
gatatggaatttggagaagatgtttaa
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