| Entry |
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| Name |
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X3
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| KO |
| K04984 | transient receptor potential cation channel subfamily A member 1 |
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| Organism |
api Acyrthosiphon pisum (pea aphid)
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| Brite |
KEGG Orthology (KO) [BR:api00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:api04040]
100165446
Ion channels [BR:api04040]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
100165446
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
A1:complement(40626960..40670081)
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| AA seq |
1212 aa
MCYTPVIFGSVLAFFTKLFNVCIDTMTSSPLEVIRQWHKVFYGCKAIQKLSSEELIKAAE
SGNLDDFNRLFIAEPARLEVRDSKGRAAVHQAAARNKLNILKFIRNHGGDLNLKDSCGNT
PLHIAIEHNSLDAVEYLLQNGADPSALNDKKQAALHLAVELNRVAVLQVMCKFKDRIEIG
QGGKHGRTALHLAAIHDNDECARILVTSFADSKLIFSVDEDTIPNRKSYSFSFLCSIFKM
CLTWKFTKYYKKRCNICPIKMRDLGADNRQPCHNGYYPIHEAAKNAASRTMEVLLQWAES
RGNSRHQMISFFDAEGNVPLHSAVHSGDFKAVELCLKSGAKISTQQYDLSTPVHLACAQG
AIDIVRLMFGLQPDEKAQCLCSCDVQKMTPLHCAAMFDRSEIVQYLIEEGADINALDKES
RSPLLLAASRSGWRTVASLIRLGADIQVKDSSKRNVLHLVVMYGGRLDEFAHEITMANHQ
GALEMLLNEKDNTGCSPLHYASRGGHIRSLESLIRLGACVNIKNYNGESPLHFGARYGRY
NIVKRLLNSEKGAFIINESDGEGLTPLHIASQQGHTKVVQLFLNRGALLHRDHKGRNPLH
LAAMSGHTQTIELLHSVHSHLLDQCDKDKNTALHLATMENKPNAITLLLYMNCKLLFNSL
DLSAIDYAIYYKFPEAALSMVTHDSRAEEIMSLKSDRHPCVTLALIASMPRVFEAVQDKC
ITKANCKKDSKQFYIKYSFSCLQCPMVQKNGATGTLKPTPLPALNAMVNHGRVELLAHPL
SQKYLQMKWNTYGKYFHLAHLLFYTIFLIFVTLFSSQLMAYNQNTFNDTSNALLTVDTTP
NVATLKTVAVMIVIYVFMNSVREGIQFYQQGWPYLLDPTNVVAILLYFSAIAMIAPILTN
CFSEYQISFASITVFLSWFTLLLNLQRFDQVGIYVVMFLEILQTLIKVLLLFSILIAAFG
LAFYILLSRGNHLSFSTIPMSLLRTFAMMLGEIDLLGTYIQPLYAEDDEENGQARTIPYP
VPVFLMLGVFMVLMPILLMNLLIGLAVGDIESVRRNAQLKRLAMQVVLHTELERKLPHVL
MEKIDKAEQIEYPNERKTKMGFLDFILRKWFCNPFSDDAIEMVLENNENHLADEIGKVKD
RLKTITSSLENQQTFLRLIIQKMEIKTEEDEVDEGVSSKEMAFTNNINGKWSSPRVRTKL
KSSFSFSKCYTK |
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| NT seq |
3639 nt +upstreamnt +downstreamnt
atgtgttatactcctgtaatttttggatcagtgttggcttttttcacaaaactattcaac
gtctgtattgatacgatgacttcatcacctttggaagtcataagacaatggcataaagta
ttctatggttgcaaggcaattcagaaattatcttcagaagaactaattaaggccgccgaa
agtggtaatttagatgatttcaatcgtctttttatagcagaaccagctcgtctcgaagtg
agagattcaaaaggtcgagctgccgtacatcaagcagctgccagaaataaattaaatata
ttgaaatttattcgaaaccacggaggagatttgaacttaaaagattcttgtggaaacact
ccattgcacatagcaattgaacataattctctggatgctgtggaatatttgcttcaaaat
ggtgctgacccgagtgcattgaacgacaaaaagcaagcggctttacatttggcggtcgag
ctaaatcgcgtagccgttcttcaagtaatgtgcaaattcaaagatcggatcgaaatcggc
caaggtggcaaacatggtaggacagcacttcacttggctgccatacacgataatgatgaa
tgtgcacgtatattggtcacaagtttcgcagattcaaaattaatattttccgttgacgaa
gatactataccaaatcgaaagtcatatagtttcagtttcttatgttcaatattcaaaatg
tgtttgacgtggaaatttactaaatattataagaaacggtgcaatatttgtccgataaag
atgcgagacctgggtgcagataatagacaaccctgccacaatggatattacccaattcac
gaagcagcaaagaatgcagcgtccagaacgatggaagtacttttgcaatgggctgagagc
agaggcaattcaagacatcaaatgatatcgtttttcgacgccgagggaaacgtgccgctt
cattctgcagtgcacagtggagattttaaggctgtggaattatgtttgaagtctggagct
aaaatttcaacgcaacaatatgatttatccactccagttcatttggcctgtgctcaggga
gccattgacatagtcagattaatgtttggtttacagcctgatgaaaaggctcagtgctta
tgttcttgtgatgtacagaaaatgacgccgcttcattgtgctgctatgtttgaccgatct
gaaatcgtacaatacctcatagaagagggagccgacataaacgctttggataaagaaagt
agatctccattgttgttagctgccagccggtcgggatggaggacagttgcaagtttaatt
cgattgggcgctgacattcaagttaaggattccagtaaaaggaatgtcttacatttagta
gttatgtatggaggaagacttgacgaattcgctcacgagatcactatggctaaccatcaa
ggagctttagaaatgttattaaacgaaaaagataatactggatgttcacctttgcattac
gcaagtagaggtggtcatatacgaagtttggaaagcttgattcggttaggtgcatgtgtg
aatataaaaaattataacggtgagagccctttacattttggagctagatatggaagatat
aatattgtaaaaagattattgaactcagaaaagggggcttttattataaatgaatcggat
ggcgaaggacttacacctttacatatagcatctcaacaaggtcatacaaaagtagtgcaa
ttattcttgaacagaggagccttacttcatcgtgatcacaaaggtcgtaatccccttcat
ttggctgctatgagtggtcatacacaaacaatagaactattacattccgtgcactcgcat
ctactagatcaatgtgataaggataaaaatacggctttgcatttagctactatggagaat
aaaccaaatgctataacattgttattgtatatgaactgtaaactattattcaactcctta
gatttgagtgcaattgattacgcaatatactataagtttcccgaagctgcattatcgatg
gttactcacgattcacgagctgaagaaataatgtcattgaaatcagataggcatccttgc
gttacattggcgttaatagcgtctatgccacgcgtttttgaagcggtacaagacaaatgc
attacaaaagctaattgtaaaaaagattccaaacaattttatataaagtattcgttctca
tgtcttcaatgtccaatggttcaaaaaaatggagcgactggtacattaaaacccactcca
ttgcccgccttgaacgcaatggtcaaccatggtagagttgaactcttagcacatccatta
agtcaaaagtacttacaaatgaaatggaacacctatggaaaatattttcatcttgcacat
ttattgttctacacgatatttttgatatttgtgactttattttcatctcaattaatggcc
tacaatcaaaatacctttaatgatacgagtaatgctctattaactgtcgataccacgcca
aatgtggctacactgaagacagtagcagttatgattgtcatttatgtatttatgaacagt
gtacgagaagggattcaattttatcagcagggttggccttacctattggatcccaccaac
gttgtggcgatattgttatacttttcagctatagctatgattgcaccgatattaacgaat
tgtttttcggagtatcaaatatcttttgccagcataactgtattccttagctggtttaca
ttacttcttaacctacaaagattcgatcaggtaggaatatacgttgttatgtttctcgaa
atcttacaaaccttgatcaaagtactgctcttattttctatattaattgctgctttcggt
ttagcgttttacatattattatcaaggggtaatcatttatcattcagtacgataccaatg
tcattattgcggactttcgcaatgatgttgggtgaaatagatttacttggaacttacata
caacctttgtacgctgaagatgacgaagaaaatggccaggccagaactataccatatcca
gtgcccgtgtttttgatgcttggcgtatttatggttctcatgcctattcttctaatgaat
ctactcattggtttggctgttggggatatagaatccgtcagacgaaatgcacagcttaaa
agactggcgatgcaggtcgtgttacacacagaactggaacgtaagttgccacacgtgctg
atggagaagatcgataaagctgaacagatcgagtatccaaacgagagaaaaacaaaaatg
ggctttttggattttatcttgcgaaaatggttttgtaacccgttctctgatgacgcaatt
gaaatggtattagaaaataacgaaaatcacttggctgatgagattggaaaagtgaaagac
cgattgaaaacgatcaccagctcgcttgaaaaccaacaaacatttctccgtctaattata
cagaaaatggaaattaaaaccgaagaagatgaagtggacgaaggagtatcatctaaagaa
atggcgtttacaaataatataaatggaaaatggtcttcgccgagagttaggactaaactt
aaatcgtcttttagtttttctaaatgctacactaaatag |
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