Acyrthosiphon pisum (pea aphid): 100165750
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Entry
100165750 CDS
T01076
Name
(RefSeq) ATP-dependent RNA helicase p62 isoform X2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100165750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100165750
03009 Ribosome biogenesis [BR:
api03009
]
100165750
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100165750
Spliceosome [BR:
api03041
]
Complex A
U1 snRNP components
U1 related factors
100165750
Complex B
100165750
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
Pre-60S particles
Helicases
100165750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Imm64
Motif
Other DBs
NCBI-GeneID:
100165750
NCBI-ProteinID:
XP_003240334
APHIDBASE:
ACYPI006679
UniProt:
A0A8R1W440
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Position
A3:complement(5253150..5258172)
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AA seq
516 aa
AA seq
DB search
MSYARNGTGGGRSNGSYGGQRSSYGGGGGGGRGGMGGAKKNPGANLQAPNWDRVQLRPFK
KEFYVPHPTIERRSYEEVDKYRTGKDITVMSSDRSPVPYPIQHFKEANFPDYVMTVIRNE
GFTEPTPIQAQGWPIAMSGKNMVGVAQTGSGKTLGYTLPAVVHINNQEPLKKGDGPIALV
LAPTRELAQQIQKVAGLFNQSTYLRSTCIYGGAPKSHQARDLMNGVEIVIATPGRLLDFL
ESRATNLQRCTYLVLDEADRMLDMGFEPQIRKIIQQIRPDRQVLMWSATWPKEVQKLAND
FLSDYIQLNVGSLTLSANHNILQNVDVCQEHEKEDKLMDLLQDIANMEENKTIIFAETKR
KVDTITRKITNMGARAVGIHGDKSQSERDHVLKQFRGGRANILVATDVAARGLDVDDVKF
VINFDYPNNSEDYIHRIGRTGRSSQKGTSYAFFTHSNSKQAKDLVAVLTEANQRIDPKLA
AMAARSFPSGGNKWYGGGGGGGNRSWGGGRPAHRKF
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtcttatgcaagaaatggtacaggtggtggaagaagtaatggttcttatggaggccaa
cgatcgtcatatggtggtggtggaggtggtggtcgtggtggaatgggtggtgccaagaaa
aaccctggtgccaatttacaagcccccaactgggaccgtgtccaactaaggccatttaag
aaagagttttatgttcctcatccaactattgaaagaagatcttatgaagaagtggataaa
tatagaactggaaaggatatcactgtgatgagctcagacaggagccctgttccttacccg
attcaacatttcaaagaagcaaattttcccgactatgttatgacagttatacggaatgaa
ggttttactgaacctactcctattcaagcacaaggatggcctattgcgatgagtggcaaa
aatatggttggagtagcccaaactggttctggaaaaactttgggttatacattgccagct
gtagtgcacataaataatcaagagccattgaaaaaaggagatggcccaattgctttagtt
ttggctccaactagagagttagcccagcaaatacaaaaggttgctggattattcaatcag
tccacatatttacggtcaacatgcatttatggtggtgctccaaaatcacatcaggctaga
gatttaatgaatggtgttgagattgttattgctacaccaggtcgtctattagatttctta
gaatctcgtgcaaccaatttgcaacgttgtacctatttagtattggatgaagccgaccgt
atgcttgacatgggttttgaacctcaaattagaaaaatcattcaacaaattagacctgac
cgacaagttttgatgtggtcagccacatggcctaaagaagttcagaagttagcaaatgat
ttcttaagcgattacattcaattgaatgttggttctttaacattatctgccaaccataat
atcttacaaaatgtggatgtgtgtcaagaacatgaaaaagaagacaaattaatggattta
ttacaagacattgctaatatggaagaaaataaaaccattatttttgctgaaaccaagcgc
aaggtggatacaatcacacgtaaaataactaatatgggggcaagagctgttggaattcat
ggagacaaatcacaatcagagcgtgaccatgtattgaaacaattcagaggtggaagggct
aatattttggttgctactgatgttgctgccagaggtttagatgtcgatgatgtcaaattt
gttatcaattttgattaccccaacaactctgaagattatattcacagaataggcagaact
ggacgatcatcacaaaagggtacctcatatgcattctttacccattccaatagcaagcaa
gccaaagaccttgttgctgttcttactgaagccaatcaacgtattgatcccaaattagct
gccatggctgcccgttctttcccgagtggtggtaacaaatggtacggcggcggcggtggt
ggtggaaacagatcttggggtggtggaagaccagcccacagaaaattttaa
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