KEGG   Acyrthosiphon pisum (pea aphid): 100167124
Entry
100167124         CDS       T01076                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03030  DNA replication
api03410  Base excision repair
api03420  Nucleotide excision repair
api03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100167124
   03410 Base excision repair
    100167124
   03420 Nucleotide excision repair
    100167124
   03430 Mismatch repair
    100167124
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:api03032]
    100167124
   03036 Chromosome and associated proteins [BR:api03036]
    100167124
   03400 DNA repair and recombination proteins [BR:api03400]
    100167124
DNA replication proteins [BR:api03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100167124
  DNA Replication Termination Factors
   ELG1-RFC complex
    100167124
Chromosome and associated proteins [BR:api03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100167124
DNA repair and recombination proteins [BR:api03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100167124
  Check point factors
   HRAD17(Rad24)-RFC complex
    100167124
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 AAA_22 AAA_assoc_2 AAA_11 RuvB_N AAA_14 ResIII RCF1-5-like_lid AAA_16 AAA_24 DEAD DUF815 AAA_5 AAA_30 AAA_7 PhoH AAA_19 Thioredoxin_6 BrkDBD DNAX_ATPase_lid Mg_chelatase TIP49 ATPase_2 AAA_3 bpMoxR AAA_28
Other DBs
NCBI-GeneID: 100167124
NCBI-ProteinID: XP_001942989
APHIDBASE: ACYPI007941
UniProt: A0A8R1W362
LinkDB
Position
A2:complement(64520074..64522686)
AA seq 329 aa
MMKAKPNLPWVEKYRPNTLDDLISHEDIIQTIGKFIKEDQLPHLLFYGPPGTGKTSTILA
CAKQLYTPAQFRSMVLELNASDDRGINVVRGQVLNFASTRTIFKSGFKLIILDEADAMTN
DAQNALRRIIEKFTDNVRFCLICNYLSKIIPALQSRCTRFRFGPLDSKQIMPRLEYVVEQ
EKVKVTEDGKKALIDLAQGDMRKVLNILQSAATAFPEVNEDSVYTCVGHPLKSDIMNILK
WLLNDDFSTTFKKIQELKIQKGLALQDILTELHTFLYRLDLPPDSLIEILTEMADIEIRL
NGGTSEKIHLGSLISAFHMIRSKLKPADD
NT seq 990 nt   +upstreamnt  +downstreamnt
atgatgaaagcaaaaccaaatctcccttgggtagaaaagtatcgaccaaatactttagat
gatttgatctcacatgaagacattattcaaacaattggtaaattcattaaagaggatcag
ttacctcatttattattttatggacctccagggactggaaagactagcacaatattagca
tgtgccaagcaattatatactccagcacagtttcgttcaatggttcttgagttgaatgct
tctgatgacagaggaattaatgttgtcagaggacaagttttgaactttgcatcaaccaga
acaatttttaaatcaggtttcaaattgattattttggatgaagctgatgctatgactaat
gatgcccaaaatgctctaagaagaattattgaaaagtttactgacaatgttcgtttttgc
ttaatttgcaattacttaagtaaaataattcccgcattacagtctcggtgtacacgcttt
cgatttggtccacttgattctaaacagatcatgcctagacttgaatatgttgttgaacaa
gaaaaagtgaaagtaactgaagatggtaaaaaagcattgatagatttggcacaaggagat
atgcgaaaagttctcaacatattacaaagtgctgctactgcgtttccagaagtaaacgaa
gattctgtatatacatgtgttggtcatccactaaaaagtgatattatgaatattttaaaa
tggttgttaaatgatgacttttctactaccttcaaaaaaattcaagaattaaaaattcag
aaaggtttggctttacaagacatattaacggagttgcacacatttttatatagattggat
ttaccaccagattctctcattgaaatactaactgaaatggctgatatcgaaatacgtctc
aatggtggaacaagtgaaaaaatacatcttggtagtttaattagtgctttccatatgata
agatcaaaattaaaacccgctgatgattga

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