Acyrthosiphon pisum (pea aphid): 100167320
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Entry
100167320 CDS
T01076
Name
(RefSeq) HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100167320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100167320
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100167320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
nSTAND3
XAF1_C
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
100167320
NCBI-ProteinID:
XP_008184597
APHIDBASE:
ACYPI008124
UniProt:
A0A8R2F9A8
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Position
A1
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AA seq
639 aa
AA seq
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MARHRNIRTTQYSDDEYYDDDDDYSNSFEDDCISPSDAIYLINHKSKFDSDQDLTDAKVN
SCLQRVTEVLGFELAKDVIAGHLINNEFNIDKTVDQIINSKIGATKVKDQQPAESRLSRP
PTVVIASSSKNKDNIIVGFGNASISGSKNKNLIATPKQTPFSTPICSPAATPRNRSPQNA
RLGSPRLDRKFNSPKSNKVRDDQGLSTSIHKDQLYLIIIGHVDAGKSTLMGHLLYKLGHV
QQRTIQKYEHESRKLGKQSFVYAWVLDETAEERNRGITMDVGHLKFETKTKDVTLLDAPG
HKDFIPNMITGASQADATMLVVDATKGEFETGFDSGGQTREHALLIRSLGITQLGVAVNK
MDTVNWSEERFGEIKTKLGLFLKQAGYKESDVTFVPCSGLSGENLATKANESLLTCWYNG
PCLMDVIDSFKPPERAISKPLRLCISDVFKSSGSGFSIVGRVETGQLRVGDKVLVQPQGE
VAQIKSIEIDELPQPIGLAGDFISVSLTGYDAQNIYSGCVLCDILLPIPVTSVLEARVVV
FNVDFPIVRGHQVVLHYQSSSESAVVSRLLAELNKSTGEVIKKNPRMIKKNTHALIKINL
SRPICVEVYSDIRQLGRVMLRSAGTTIAAGLVTKVNFNK
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggctcgccacaggaacatacggacgacgcaatattccgatgatgaatattatgatgat
gatgatgattattcaaattcatttgaagatgactgtatttctccaagtgatgcaatttat
ttaattaatcacaaatccaagtttgattcggaccaagacttaactgatgccaaagtaaat
tcatgtttacaaagagtaacagaagttttgggctttgaacttgccaaagatgttatagca
gggcatttgattaataatgaatttaacattgataaaacagttgatcaaataataaattca
aaaattggtgctacaaaagtaaaggatcagcaacctgctgagagcagattaagtaggcct
cctactgttgttattgcttcttcatcaaaaaataaagacaacattattgttggttttgga
aatgcatctatttcaggttcaaaaaataagaacttaattgcaacacctaaacaaacacct
tttagcacacccatatgctcaccggcagcaacacctcgcaatcgatctcctcaaaatgct
cgtttaggatcaccacgtttagatcgtaaattcaattcgcccaagagcaacaaagtaagg
gacgatcaaggattatcaacttctattcacaaggatcaactttatttaattataattggt
catgtcgatgcaggaaaaagcactttaatgggacatttactatataaattaggacatgtg
cagcagcgaactatacaaaagtatgagcatgaaagtagaaagttaggtaaacagagtttt
gtctatgcttgggtattagacgaaactgctgaagaaagaaaccgtggtattacaatggac
gtaggtcatttgaagtttgaaacaaaaactaaagatgttactttgctggatgcacccgga
cataaagattttataccaaatatgattacaggggcttctcaggctgatgcaactatgtta
gttgtagatgcaactaaaggagaatttgaaactggatttgacagtggagggcagacacga
gagcatgccctcttaatacggtctctaggaattactcaactcggagttgctgtgaataaa
atggatactgtcaactggtctgaagaacgatttggggagattaaaacaaaacttggactt
tttttgaaacaagctggttacaaagaatctgatgttacatttgtaccatgctctggatta
agcggtgaaaatctggctacaaaagcaaatgaatcattactaacctgttggtataatggt
ccttgtctaatggatgttattgattcatttaaaccaccggagcgggcaatttctaaacca
ttaaggttatgtataagtgatgtttttaaaagttcaggatcaggattttcaattgtcgga
cgagttgaaacaggacagcttagagtcggtgataaggttttggtacaaccacaaggagaa
gttgcccaaattaaaagtattgaaatagatgaattgccacagccaattggattagctggt
gactttatcagtgtttcgcttactggttatgatgcacaaaatatttactccggttgcgtg
ttatgtgatattttgcttccaataccagtaacatcagtattagaagcacgagtggttgta
tttaatgtggatttccctattgttcgtgggcatcaagttgtattgcactatcaaagttcg
tcagaatcagcagttgtcagtagacttttagcagaactaaataaaagtactggtgaagtc
atcaagaaaaatcctcgaatgataaaaaaaaatactcatgctcttatcaaaataaatcta
tcaaggccaatttgtgtagaggtatattcagacatcagacaattgggtagagtgatgtta
cggtctgctggtactactatagcagctggtcttgttactaaagtcaattttaataaataa
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