KEGG   Acyrthosiphon pisum (pea aphid): 100167434
Entry
100167434         CDS       T01076                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03030  DNA replication
api03410  Base excision repair
api03420  Nucleotide excision repair
api03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    100167434
   03410 Base excision repair
    100167434
   03420 Nucleotide excision repair
    100167434
   03430 Mismatch repair
    100167434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:api03032]
    100167434
   03036 Chromosome and associated proteins [BR:api03036]
    100167434
   03400 DNA repair and recombination proteins [BR:api03400]
    100167434
DNA replication proteins [BR:api03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    100167434
  DNA Replication Termination Factors
   ELG1-RFC complex
    100167434
Chromosome and associated proteins [BR:api03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    100167434
DNA repair and recombination proteins [BR:api03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     100167434
  Check point factors
   HRAD17(Rad24)-RFC complex
    100167434
SSDB
Motif
Pfam: AAA Rep_fac_C RCF1-5-like_lid DNA_pol3_delta2 AAA_lid_RFC1 Gp44_lid AAA_11 AAA_16 AAA_19 RuvB_N Rad17 AAA_30 AAA_24 Mg_chelatase AAA_22 AAA_7 AAA_assoc_2 ResIII DNAX_ATPase_lid DUF815 SLFN-g3_helicase AAA_5 bpMoxR nSTAND3
Other DBs
NCBI-GeneID: 100167434
NCBI-ProteinID: XP_001948634
APHIDBASE: ACYPI008231
UniProt: A0A8R1W5Q1
LinkDB
Position
A1
AA seq 359 aa
MDSFLKTGKINQDQQSTSSGLKSKDGSRGISNSTTPWVEKYRPRTVDEVSEQSEIVAVLK
QCLEQGADMPHLLFYGPPGTGKTSTIIAAARQLFGDMYKNRMLELNASDDRGIQVIRDKV
KTFAQLTASDRRPDGKPCPPFKIVVLDEADSMTAPAQAALRRTIERETKTTRFCLICNYV
SCIIDPLTSRCSKFRFKPLSHEIMLTRLEHICKEEGVKCAPRVLARLVDASGGDMRRAIT
SLQSTARLKGEVGIEEVDVLEVVGTVPDIWLDRMIDMGRMYDYQKMDGFVEDLIFEAYSA
SQILEQLHDKIVFSTDLKDNQKAIICKSISICAYRLQEGCSEYVTLLNLLCSVAKALKG
NT seq 1080 nt   +upstreamnt  +downstreamnt
atggattcttttctaaaaaccggaaaaatcaaccaagatcaacaatcaactagcagtggt
ctcaagagtaaagatggatcacgaggaatttctaacagcaccacaccttgggtggagaaa
tatcgacctcgtacagttgatgaggtatctgagcagtcagagattgttgcagtacttaaa
caatgtttagaacaaggtgccgatatgcctcacttattgttttatggaccgcctggaact
ggtaaaactagtaccataattgcagctgcccgccagctatttggagatatgtacaaaaac
cgaatgcttgaacttaatgcatctgatgatcgtggtattcaagttattcgagataaagtt
aaaacttttgcacagcttactgcttctgaccgaagaccagatggtaaaccttgtccgccg
tttaaaattgttgtgttagacgaagctgactcaatgacagcacctgcccaagcagcgctt
aggcgtaccattgaacgagagacgaagactactagattttgccttatttgcaattatgtg
agttgcattattgacccattgacgtcccgttgctccaaattcagattcaaacctttatca
catgagataatgctaactcgtcttgagcacatatgtaaagaagaaggagtaaaatgtgca
ccacgggtgctggcacgattggttgatgcttccggtggagatatgcgtagagcaattaca
tcactccaaagcacagctagattgaaaggagaagttggtattgaagaagtagatgtacta
gaagttgttggcactgttccagacatctggttagatcgtatgatagatatgggtcgcatg
tacgactatcaaaaaatggatggttttgtggaagatcttatatttgaggcatattcagca
tctcagattttagagcaattgcatgataaaatagtgttttcaacagatttaaaagacaat
caaaaggcaataatttgtaaatctattagtatttgtgcttatagactacaagaaggttgt
agtgaatatgtcactcttttaaatctattatgttcagttgctaaagcattaaaaggttaa

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