Acyrthosiphon pisum (pea aphid): 100167458
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Entry
100167458 CDS
T01076
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100167458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100167458
Spliceosome [BR:
api03041
]
Complex C
Other components
Step II factors
100167458
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_Vps41
WD_LRWD1
NBCH_WD40
PQQ_2
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
100167458
NCBI-ProteinID:
XP_001951193
APHIDBASE:
ACYPI008255
UniProt:
A0A8R1W2T9
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Position
A2:complement(12594876..12600138)
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AA seq
563 aa
AA seq
DB search
MLNLKEYGSSSDEEGITKDETPLETPFNNEISVHELSAKFAVNAAPNVLPPAHDTSVQYL
DVGTKEITRNMKYEELFTPVAGPENPFLTQQQKAPKNMMTGFVEKAHISDFMFETQRRTF
HSFGYALDPTVDSNEIIGRKPDDTDEFKTVFESVPKRPADKRKRHKNDKPEDIDGYLGPW
GCYVDEEKISKPEGEDAIAIEEFLAKKHKRGKKVEDKSFKEKSILHIKDPVDYQGRSFLH
IPQDVGVNLKSNAPPDRCFLPKAHIHTWQGHTKGISAIRWFPRSAHLLMSCSMDCRVKLW
DVYRDRKCIRTYIGHTQAVRDTCFNNKGTKFLSAAYDRYVKLWDTETGDCIKSFTNHKVL
YCVKFNPEEEKQHLFVAGTADKKIVCWDTRSGNIVQEYERHLGAVNSITFVDENRRFVTT
SDDKSLRVWEWDIPVDMKYIADPTMHSMPSVTIAPNKKWLACQSMDNKIVIFSAMNRFKV
NRKKSFSGHMVAGYACSLDFSPDMSYLVSGDADGKVFIWDWKTSRLYTKWKAHDNVCIAA
LWHPHEPSKVATAGWDGLIKYWD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgttgaatttaaaagaatatggtagcagtagtgatgaagaaggtataacgaaagatgaa
acacctctagaaacaccttttaataatgaaataagtgttcatgaattaagtgcaaagttt
gcagtaaatgcagctccaaatgttttgccaccagcacatgatacatcggttcagtatctt
gatgttggaactaaagaaataacacggaatatgaagtatgaagagctttttacaccagtc
gctggaccagaaaatcctttcttaacacaacaacaaaaagcgcctaagaacatgatgact
ggatttgttgagaaagcacatattagtgatttcatgtttgaaactcaaagaagaacattt
catagttttggttatgctttggatcctacagtcgattccaatgaaattattggtcgtaag
cctgacgataccgatgaatttaaaacagtatttgaatccgtgccgaaaaggccagctgat
aaaagaaaacgtcataaaaatgacaaaccagaagatattgatggatatctaggaccttgg
ggatgttatgttgatgaggagaaaatatcaaaaccagaaggagaagatgctattgctatt
gaagaattccttgcaaaaaaacataaacgcggcaaaaaagttgaagataaaagcttcaaa
gaaaaatcaattctgcatattaaagatcctgttgattatcaaggacgttcatttttacat
attccacaagatgtaggtgttaatcttaaatcaaatgcgcctcctgatagatgtttcctt
cctaaagcacatatacatacatggcagggtcatactaaaggtatatcagctattagatgg
ttcccgaggtctgctcatttacttatgtcttgcagcatggattgtagagttaagttgtgg
gatgtctatagggatagaaagtgtattcgaacttatataggtcatacacaagctgtcaga
gatacatgtttcaacaataaaggaacaaaatttttatcagcagcatatgatcggtatgtt
aaattatgggacacagaaactggagactgcataaaaagttttacaaatcataaagtactg
tattgtgtaaaattcaacccggaagaagagaaacaacatttatttgttgctggtactgct
gataaaaaaattgtttgttgggacactagatcaggaaatattgttcaagaatatgaacga
catttgggagcagtaaacagtatcacctttgttgatgaaaatagacgatttgtcacaaca
tctgatgataaaagtctccgtgtttgggaatgggacataccagtggatatgaagtatata
gctgatccaaccatgcattcaatgccaagtgtaacaattgcaccaaataaaaaatggttg
gcttgtcaaagtatggataataaaatagttatattctcggcaatgaatcgtttcaaagtg
aatagaaaaaagagtttttccggccatatggtggcagggtatgcctgttcattagacttt
tcacctgatatgagttacctagtctcaggagatgctgatggaaaagtatttatttgggat
tggaaaactagtcgtttgtatacaaaatggaaagcacacgacaatgtgtgtattgctgcg
ttatggcatccacatgagcctagcaaagtggcaactgctggatgggatggactgatcaaa
tattgggattaa
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integrated database retrieval system