Acyrthosiphon pisum (pea aphid): 100167480
Help
Entry
100167480 CDS
T01076
Name
(RefSeq) cleavage stimulation factor subunit 1-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100167480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100167480
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100167480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
CSTF1_dimer
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_VPS8
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Cytochrom_D1
VPS8_N
Beta-prop_NWD2_C
Motif
Other DBs
NCBI-GeneID:
100167480
NCBI-ProteinID:
XP_029345797
APHIDBASE:
ACYPI008276
UniProt:
A0A8R2NQM5
LinkDB
All DBs
Position
A2:complement(41022405..41024429)
Genome browser
AA seq
440 aa
AA seq
DB search
MSEINNDKPEMCIKNIDNLYRLIISLIWFSQLYYDGHTSIASSLAVKVNADPPCSPSDEL
RSLVMKYLQHETDGKRDSEQALNLNPIQQMLIGPGIDLEFNNDVICTAPEPSLYKTIFVA
SHKGACRAGAFSPDGQLIATGSNDASIKILDVEKMHKAHEIGSTKNEGQVRPVIRTLYDH
LEGVTCLEFHPNKPILASGSRDCHVKFFDYSKIMLKKAVKTLKDVVPIKCISFHPLGDHM
VVGTKCPIIRLYDVNTVQCYVSSVPSHQHTGPVTSIKFEPGAKYFVSSSQDGSIKLWDGI
SNKCVNTFEKAHDGSEVCSVTFSKNGKFILSSGKDSLVKLWELSTSRCLITYTGAGTMEK
QKHHTQALFNHTEEYVMFPDEATTSLCTWNARNASRQKLLSLGHNGPIRSIVHSPNSAAF
LTCSDDFRARFWYTRHLTGS
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaataaataatgacaaaccggaaatgtgtattaagaatattgataatttatac
agactcattataagtttgatttggtttagtcaactgtattatgatgggcatacatcaatt
gcttcaagcttagctgtcaaagtgaatgctgatccaccttgttctccatcagatgaacta
aggagtttagtgatgaaatatttacaacatgaaaccgatggaaaaagagattctgaacaa
gcattaaacttaaatccaatccaacaaatgttaatcggaccggggattgatctggagttt
aataatgatgttatctgtactgctcctgaaccatcgctttataaaactatatttgtagca
tcccacaaaggtgcctgtagggctggtgcttttagtccggacggacagttaattgcaaca
ggaagtaatgatgcatcaatcaaaattttggatgttgaaaaaatgcacaaagcacatgag
attggtagcactaaaaacgaagggcaagtacgtccggtaattcggacattgtatgatcat
ttggaaggagtgacatgcttggagtttcaccctaacaaaccaattttggcttcaggttct
agagattgtcatgttaaattttttgattattcaaaaataatgttaaagaaagcggtcaag
acattaaaagatgtggtaccaataaaatgtataagttttcatccccttggagaccatatg
gtagtgggcaccaaatgcccaatcattagactttatgacgtaaatacggttcaatgttat
gtaagttcagttcctagccatcaacatactggtcctgttacatcaataaagtttgaacca
ggtgccaagtactttgtgtcctctagtcaagatggttcaattaaattgtgggacggtata
tctaataaatgtgttaacacatttgaaaaagcacacgatggtagtgaagtgtgttctgtg
actttttcaaaaaatggaaagttcatcttatcatcaggcaaagattctttagtgaaactt
tgggagttgtctactagtagatgcctgattacatatactggagctggaaccatggaaaaa
caaaaacatcatactcaagcattgtttaatcataccgaggagtatgtcatgtttccagat
gaagctactacatcgttgtgtacatggaatgcacggaatgcttctcgacagaaactttta
tcactaggacataatggacctattcgttcaatagtgcattctccaaattcagcagcattt
ttaacttgttcggatgactttagagcccgtttttggtatacaagacacttgactggatca
taa
DBGET
integrated database retrieval system
