Acyrthosiphon pisum (pea aphid): 100167493
Help
Entry
100167493 CDS
T01076
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100167493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
api03009
]
100167493
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100167493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
UTP15_C
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_NWD2_C
Beta-prop_TEP1_C
B-prop_COPA_B_2nd
Beta-prop_RIG_2nd
WD40_RFWD3
NBCH_WD40
WD_LRWD1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_Vps41
eIF2A
Beta-prop_NUP159_NUP214
FCP1_C
Beta-prop_WDR75_2nd
U79_P34
Motif
Other DBs
NCBI-GeneID:
100167493
NCBI-ProteinID:
XP_008179491
UniProt:
A0A8R2B3W8
LinkDB
All DBs
Position
A1:78043615..78050191
Genome browser
AA seq
508 aa
AA seq
DB search
MTSFKKSFVKPFARPSELYTVEDSYWKKLTSPVLVKEFGPIDYVHFSRRAPYHFAISCSA
RVQVYNPVTKVVTKNLNKFKEAAYGATFRSDGQLLCAGGEESVVRLFEVNTKSMLRXFRG
HRAAVHRTYFTRDGHHIASFSDDKTVSLWDISSQQISGHYEGYHKDYIRAGCVSPVSENI
VVSGGYDKQINMFDSRTKSVTMSVDHESPVESLIFLPSGSLLISAGGTEVRIWDVLAGKL
LAKLTQNHKTVTALCLAKQGTSIVTASLDKHVKIYNVSTFQLSHDITYPSAVLSIDISRD
DKTIVAGTVDGIVNITKRDTSVKHNYENKKRQAKAAAIVLSDGIDMSVPLMQPDQMSKFD
TALRKFNYSQSLDLVLVHAVAFKKPHITVYVIDELCRRNGLLQAISGRNSKQLAFLLHFI
IRYIGVRKLSKTLTHVASTVIDCYWDSFDACTLEVRALLTKLHTVVENEILLTKRLLAID
GLVKMLLISSEVLSDASQTTKLDNKIVV
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatttaaaaaatcatttgtgaaaccatttgctcgtcccagtgagttatatact
gtcgaagactcttattggaaaaaacttactagccctgtattggtcaaagaatttggtccc
atagactatgttcatttttcacgacgtgcaccttatcattttgcaatttcatgttctgct
cgagtccaagtttataatcctgttacaaaagtagtaactaaaaacctcaataaatttaaa
gaagctgcttatggtgcaacatttcgttcagatggccagttattatgtgctggtggcgag
gaatctgttgtgagattatttgaagttaatacaaagtctatgttgagatagttcagaggg
catagagctgctgttcaccgtacatatttcacaagagacggacatcatattgcaagtttt
tcagatgacaaaactgtttcattatgggatataagtagtcaacaaatcagtggacattat
gaaggatatcataaggactatattagagcaggatgtgtttctccagtttctgaaaatata
gttgtttctggtggctatgacaaacaaattaatatgttcgattcaagaactaaatcagta
actatgtcagttgaccacgagtcacctgtagaaagcttaatatttttaccttctggcagc
ctacttatatctgctggtggtactgaggttcgtatatgggatgttttagctggtaaattg
ttggctaaacttactcaaaaccataagactgtaactgcgttatgcttagctaagcaaggt
acatccatagtaactgcttcattggacaagcatgttaagatttacaatgtatcaacattc
caactatctcatgatattacgtatccaagtgcagtacttagtattgatataagtagagat
gacaaaacaattgtagctggaactgtggatggaattgtgaacataactaaacgtgacaca
tcagtgaaacataactatgaaaataaaaagaggcaagctaaagctgcagcaattgtccta
tctgatggtatcgatatgagtgttccattaatgcaacctgatcagatgagcaagtttgat
actgctttaaggaaatttaattatagccaatcattagatttagttttggttcatgcggtt
gcattcaagaaacctcatataacagtttatgtgattgatgaattatgcaggagaaatggc
ttactgcaagcaatatctggtagaaattcaaaacaattagcatttttattacattttatt
attcggtatattggagtcagaaaattatctaaaacattgacacatgttgcttcaacagtt
attgattgttattgggattcatttgacgcttgcactcttgaagttcgtgcactgctgaca
aaattacatactgttgttgaaaatgaaatattactaaccaagagattgttagctattgat
gggttagttaaaatgttacttattagttctgaagtattatctgatgcttctcagactaca
aaacttgataataaaattgttgtttaa
DBGET
integrated database retrieval system
