Acyrthosiphon pisum (pea aphid): 100167909
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Entry
100167909 CDS
T01076
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03013
Nucleocytoplasmic transport
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100167909
09122 Translation
03013 Nucleocytoplasmic transport
100167909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100167909
03041 Spliceosome [BR:
api03041
]
100167909
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100167909
Spliceosome [BR:
api03041
]
Complex C
Other components
EJC/TREX
100167909
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100167909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
100167909
NCBI-ProteinID:
XP_029341293
APHIDBASE:
ACYPI008659
UniProt:
A0A8R2JL44
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All DBs
Position
X:114935421..114939979
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AA seq
582 aa
AA seq
DB search
MPVSKFREELKNILIEPNTTTITSIKQILHENNYFNLSNAERRPILDQVLRCHVLDIVSS
KPPNLYDVCKMWTSFTIELVRNEMCTAIMPVAILSDMFAVTTINVCEKIFDHVESNVNVL
KEPRFFMASKNNLLRMCNDILRRLSRSQNTVFCGRILLFLAIFFPFSERSGLNIISEFNL
ENLTEYLNENHFDQTEYMPASIAEDEAKLDIIIEKENDDNNLYLKFWSLQDYFRNPNQCY
ETEHWKLFISHTDFIISSFQSHKSEHVNKIDNKSAEQNTYYFPKYLPNQKILKLQLSDVN
FRRNILIQFLLLFQYLDAPVKFKLDSFKIKPEQQEWIKNSITTIYELINNTPPDGVRFSE
VVKSILQREEQWNKWKNDGCPEVTKRLPTSDQSDMTAPKRRNLGDVIKNMTANNKVFLGD
PDLTKLWNLKPDNLEACKRPERDFLPSFDSFFKEAFEQLDAELCIESQNKKVNDINFGWR
ALRLLARKSPHFFANSGDSIQKVPEYLENMIKKTLSKEEISINQEPDKHVSPNNEFKKES
IIETEEIPKQIIDQVAAAIGEKWTILAEKLGYQPDKVTCKHV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttagtaaatttcgtgaagaattgaagaatatccttatagaaccaaatactaca
acaattacttctattaaacaaattttacatgaaaacaattatttcaatcttagtaatgca
gaaagacgtccaatattggatcaagtgttaagatgccatgttttagacatagtatcatca
aaaccaccaaatttatatgatgtttgcaagatgtggacatcatttacaattgaacttgta
cgaaatgaaatgtgtactgctataatgccagtagctatattgtcggatatgtttgctgtg
actactatcaatgtttgtgaaaaaatttttgatcatgtggaatccaatgtaaatgtttta
aaagagcctagattttttatggcaagcaagaacaatttattacgaatgtgcaatgatata
ttacgtcgtttatctagatcacagaacacagtcttttgtgggcgtattttattatttttg
gccatattttttcctttttctgaacgctcaggtctaaacattataagtgaatttaattta
gaaaatttaactgaatatttgaatgaaaatcattttgatcaaactgaatatatgccagct
tcaattgctgaagatgaagctaaattagatattataattgaaaaagagaatgacgataat
aatctttatttaaaattttggtcattgcaagattactttagaaatcctaatcaatgttac
gaaacagaacattggaaattgtttatctctcatacagatttcataatttcaagttttcaa
agtcataagtcggaacatgttaacaaaatagataataaaagtgctgaacaaaatacgtac
tactttccaaaatatttgccaaatcaaaaaattttaaaattgcaattaagtgatgtaaat
tttaggcgtaacattcttattcaatttttattgcttttccagtatttggatgctcctgtc
aaatttaaacttgatagtttcaagattaaaccagagcaacaagaatggattaaaaattct
attactactatttatgaacttattaataatacaccacctgatggtgtcagattctctgaa
gtagtaaagagtatattacagagagaagaacaatggaataaatggaaaaacgatggttgt
ccagaagtaacaaaaagactacctacaagtgatcaaagtgatatgaccgcgcccaaacga
agaaatttaggggatgttataaaaaatatgactgctaataacaaagtttttcttggagac
cctgatttaaccaagctgtggaatttaaagccagataatttagaagcttgtaaaagacct
gaacgagattttttaccatcatttgattcatttttcaaggaagcatttgagcaattggat
gcagaattatgtattgaaagtcaaaacaaaaaagtaaatgatataaactttggatggcgt
gcactaagactattagctcgtaagagtccacatttttttgccaacagcggtgattctatt
caaaaagtacctgaatatttagaaaatatgattaaaaaaacattgagcaaagaagaaata
tccatcaaccaagagccagataagcatgtatcaccaaataatgaatttaaaaaagaatct
ataattgaaacagaagaaattcctaaacagataattgatcaagttgcagctgcaatagga
gaaaaatggactatacttgctgagaaacttggttaccagccagataaggtaacatgtaaa
catgtttaa
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