Acyrthosiphon pisum (pea aphid): 100168084
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Entry
100168084 CDS
T01076
Name
(RefSeq) protein SMG8
KO
K18734
protein SMG8
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100168084
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
100168084
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Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
100168084
NCBI-ProteinID:
XP_001942644
APHIDBASE:
ACYPI008816
UniProt:
A0A8R1W2X9
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Position
A1
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AA seq
929 aa
AA seq
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MKYKKISLPFDEHFISSIQNNTKPTIIVSIFGKSSLISKSCKARFVNDFYDRPIFNSSLV
QATSNSKLQSSIECFYDEPGGIVYLHLTGTFDSHSITQNIDELSTEIEEKGFLRVWSSLK
YNYACSLLFLFNVSHILVLTNPVPVFDTSYLSYFKALDCSRSKFLNAIKSTLSKIPNVST
SWMENTRLCSPRLLFYYETCPNEFKKTKQTNAPCHPGLKKAEHSLEDQIYCILRKRRIIS
NISTHSIFAIPANQEYVFMDDSPDQVLDWDEFLTNSLINLCNNPSVEIKDRFIDCEVKED
IEKDFLNKSHNIKKFLFDHIDVAFKKGFDDNIGRHAITIPNYFEAPAFGTWCLVANEMYN
LFVLANNLDEESKIAMETLRSVLDIDTNFSERRCRKVQPIAMAAYQENLPSHYNRNYHDT
KVAQALSVFAQHARGPLLDDYIQILVQDCDKLWQSGRQMCETLSLTGNPCTQPLHKGGTV
DGPIKEPEQDDNHINRDELLIMEHSSSVMYLSACNCGHKQGTREDPFTIRTANYDFYQIM
ANDCVCGCLDRINFPVFQPSTQDYRAAQLFAKPPVIAGRKNSAGLLHTPTQMGHTQVLSL
GGVFASCHSVDPINEILGEASRNREVPDRQGLTSVELTNMQKNEDIISGNQIVIRVTDTD
GDTKDKSLVRQPSTTEYLPGMLHTESPNSLLPQFPSWSLVCLGSSCLYSHNIGLQETQHP
GFLNSTAYLLPWDVTVRLEHHPRDRYWNFDKNKINSSPIQRGRKTKGSREFSVKIFIGVE
YECPRGHRFMCSAPDKILTTAGNGIVKENGNKVSNSDMPLYFPCPCSSAPLIAQLMRIHV
VTPKAPVHVTLNPMVQPEENGGPIFVTGFDTPIELTQSTYWVLRLPYVYAGDRGPYLPPK
DPSQIGQGKLLKGVYSVAEATTDNNKLNI
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgaaatataagaaaatatctttgccttttgacgaacattttatcagttcaattcaaaat
aataccaaaccaactattattgtttctatatttggaaaatcttcattaatctcaaaatca
tgcaaggctcgatttgtgaatgatttctacgatcggccaatatttaattcatctttagta
caagcaacttcaaattcaaaacttcagtcatcgattgagtgtttttatgatgagccaggt
gggattgtttatcttcacttaactggtacatttgatagtcattcaatcacacaaaacatt
gatgaattatcaaccgagattgaagaaaaaggttttctaagagtttggtcatcactgaag
tacaattatgcatgttcattattgtttttgtttaatgtatcacacattcttgtactaaca
aatcctgtccctgtatttgacactagctacttgagctatttcaaagctcttgattgttca
agatcaaaattcctaaatgcaataaaatctactttatcgaaaatacctaatgtatctaca
agttggatggagaataccagactgtgttcaccaagattattattttattatgaaacatgt
ccaaatgaatttaaaaaaactaagcaaacaaatgcaccatgtcacccaggcttaaaaaaa
gctgaacattctttagaagaccaaatttactgtatactcagaaaaagacgaattatttca
aatataagcactcattcaatatttgctatcccagctaatcaagaatatgtatttatggat
gattcacctgatcaggtcttagactgggatgaatttttaactaactcattgataaatttg
tgcaataatccatctgttgaaattaaagatcgtttcattgattgtgaagttaaagaagat
attgagaaagactttttaaacaaaagtcataatataaaaaagtttttatttgaccatatt
gatgtagcattcaaaaaaggatttgatgataatataggtagacatgctattacaattcca
aactattttgaggctccagcttttggtacttggtgtctagtggcaaatgaaatgtacaat
ttatttgtcttggcaaacaatctcgatgaagagtctaaaattgctatggaaacattaaga
tcagttttagatattgataccaattttagcgagagacgttgccgtaaagttcagcctatt
gccatggcagcttatcaggaaaatttgccatcacattacaacagaaactatcatgacact
aaagtagctcaagcactttcagtgtttgctcaacatgctcgtgggcctttactcgatgat
tatattcaaattttagttcaagactgtgataaattatggcaatcaggtcgtcaaatgtgt
gaaactctttctttgactggaaatccatgtacacaacctttacataaagggggtactgtt
gatggacctatcaaggaaccagaacaagatgacaaccatattaatagggacgaactactt
attatggaacattcaagtagtgtcatgtacttgtcagcatgcaactgtggtcacaagcaa
ggtactcgtgaagatccatttacaattagaacagctaactatgatttttatcaaattatg
gccaatgattgtgtctgtggttgtttagatagaattaatttcccggtgtttcaacctagt
acacaagattatagagcggcacaattgtttgcaaagcctcctgtgatcgctggtagaaaa
aacagtgccggtttattacacacaccaactcaaatgggccatacacaagtattaagttta
ggaggagtttttgccagttgtcattctgtagatccaataaatgaaattttgggcgaagca
tcgcgaaacagagaagttcctgatagacagggccttacttcggttgaattgacaaacatg
caaaaaaatgaagacatcatctcaggaaatcagattgttattagagtaactgatacagat
ggtgacacaaaagacaaatcattagttcgacaaccaagtaccacagaatacttaccaggc
atgttgcataccgaatcgcctaatagtttgttgcctcagttcccatcttggtctttagta
tgtctaggctcttcttgtttgtattcacataatataggacttcaagaaacacaacatcct
ggatttttaaattctacagcttatcttctaccttgggatgttactgttagattagaacat
catcctagagatagatactggaattttgataaaaataaaattaattcatctcctattcaa
cgaggacgaaaaactaaaggttctcgagaattttctgttaaaatattcatcggagttgaa
tatgaatgcccaagaggtcatcggtttatgtgttcagcacctgacaagatattaactact
gcaggtaatggtatcgtgaaagaaaacggaaataaggtatctaattcagatatgccatta
tactttccgtgcccttgcagctcagctcctttgatagctcagctaatgagaatccacgtt
gtaactcctaaagcacctgtacacgtaactttaaatcctatggtgcaacctgaagaaaat
ggtggtccaatatttgtaactggattcgatacacctattgaacttacacagagtacttat
tgggtacttcgactgccttatgtgtatgcaggtgatcgaggtccatatcttccaccaaaa
gatccatcacagataggtcaaggaaagcttcttaaaggagtttatagtgtagccgaagca
acgacagataacaacaaacttaacatttaa
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