KEGG   Acyrthosiphon pisum (pea aphid): 100168121
Entry
100168121         CDS       T01076                                 
Name
(RefSeq) THO complex subunit 3 isoform X2
  KO
K12880  THO complex subunit 3
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03013  Nucleocytoplasmic transport
api03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100168121
  09122 Translation
   03013 Nucleocytoplasmic transport
    100168121
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100168121
   03041 Spliceosome [BR:api03041]
    100168121
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100168121
Spliceosome [BR:api03041]
 Complex C
  Other components
   EJC/TREX
    100168121
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100168121
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_CDC20-Fz Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_Prp19 WD40 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 ANAPC4_WD40 WD40_Gbeta EIF3I Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_Aladin Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd RMC1_N Beta-prop_NOL10_N Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_EML DSE1_N Tricorn_2nd eIF2A WDR90_beta-prop_4th PAC11 Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_VPS8 Peptidase_S9_N Cytochrom_D1 Beta-prop_SCAP TRM82_WD Beta-prop_TEP1_C Beta-prop_NUP159_NUP214 Beta-prop_EIPR1 Beta-prop_WDR75_1st PD40 Beta-prop_DCAF12 DPPIV_N
Other DBs
NCBI-GeneID: 100168121
NCBI-ProteinID: XP_001949981
APHIDBASE: ACYPI008848
UniProt: A0A8R1W5F0
LinkDB
Position
A2
AA seq 325 aa
MSYWKHFDVNVNELKDYFKTHKSVKEFQAHSSKVHSVGWSCDGKRLASCSFDKSVATFTL
DKDRLNKEYTYKGHSGSVDQLCWHKSNPDLLSTASGDKTVKVWDVRHQKCSNTILTKGEN
INITWSPDGHTIAVGNKEDLITFIDMRTLKPISEQQFNFEVNEMSWNNESDLFFLTNGLG
CVYVLSFPDLVQRHVVKAHPGTCICIEFAPSGHYFAVGSADASVSLWDLENLACVQTYTR
LDWPVRALSFSYDGKMLASGSEDLYVDIADVTTGEKITDIPIEAATFTVAWHPKQYLLAF
ACDDKEQFDRKRDTGNLKVFGFSSE
NT seq 978 nt   +upstreamnt  +downstreamnt
atgagttattggaaacattttgacgtcaatgtgaatgaattaaaagattatttcaaaact
cacaagtccgtcaaagaatttcaagcgcattcatcgaaagtacattcagttggttggagt
tgtgacggcaaacgtttagcgtcgtgttcatttgacaaatctgtggctacattcacattg
gacaaagaccggctgaacaaggaatacacatataaaggacacagtggtagtgtggatcag
ttatgttggcataagtctaacccagatttactgagtacagccagtggtgacaaaacagtc
aaagtatgggatgtgagacaccagaaatgttcgaatactattttgaccaaaggagagaat
ataaacatcacatggtctcctgatggacatacaattgctgttggaaataaagaggacttg
ataactttcatcgatatgcgcacccttaaaccaattagtgagcaacagttcaattttgaa
gtgaacgaaatgtcatggaacaatgaaagcgatttgtttttcttaacaaatggtctagga
tgtgtttatgtgttaagtttcccagacttagttcagcgacatgtggttaaagctcatccg
ggtacatgcatttgtatagaatttgcaccaagtggccattattttgctgttggctcggca
gatgcttctgtgtctttgtgggacctcgagaatttggcttgtgtacagacttacaccaga
ttggattggccagttcgagctttaagtttttcctatgatggtaaaatgttggcatcaggt
agtgaagatttgtatgtagacattgcagatgttactacaggagaaaaaattactgatata
ccaattgaagcagcaacattcactgtggcatggcatccaaaacagtatttattggcattt
gcatgtgatgataaagaacaatttgataggaaaagagatactggaaatcttaaagtattt
ggttttagttctgaataa

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