Acyrthosiphon pisum (pea aphid): 100168379
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Entry
100168379 CDS
T01076
Name
(RefSeq) collagen alpha-2(IV) chain isoform X12
KO
K06237
collagen type IV alpha
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api04382
Cornified envelope formation
api04512
ECM-receptor interaction
api04518
Integrin signaling
api04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
api00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100168379
04518 Integrin signaling
100168379
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100168379
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100168379
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
api04147
]
100168379
00536 Glycosaminoglycan binding proteins [BR:
api00536
]
100168379
Exosome [BR:
api04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100168379
Glycosaminoglycan binding proteins [BR:
api00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100168379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Chitin_bind_4
Motif
Other DBs
NCBI-GeneID:
100168379
NCBI-ProteinID:
XP_001944912
APHIDBASE:
ACYPI009085
UniProt:
A0A8R2A526
LinkDB
All DBs
Position
A2:complement(80513026..80556089)
Genome browser
AA seq
1650 aa
AA seq
DB search
MRLQRNGKMIPRPRTNMYLILFSILGVQFALSQQTNPNDLEVVLNIEDSNKTQYHEQNFD
TMAYIFGYEVGPNGQFHHENKGPDGFTYGCYGYVDPEGKLQATHYISDGWGYRVVTPGES
VEIFHHKHDPADENQANESSDGGSEHEHHGHHGVVTAWGDLYFPKGCGGGRPIQGTGQLG
GSGSSGYPSFIGVGQPGPAGAPGQPGTPGLPGSPSSVYPSYPGSQGSPGSPGAPGSPGLP
SLPSYQKPTVYPTSTYPGSSGSPGSPGSPGSPGTPGLPGKPGSLGYPSYQQPSPYPSAPG
SSGLPGTPGTPGTPGQPGTPGLPGSPSSAYPSYPGSQGSPGSPGAPGSPGLPSLPSYQKP
TVYPTSTYPGSSGSPGSPGSPGSPGTPGLPGKPGSLGYPSYQQPSPYPSAPGSSGLPGTP
GTPGAPGIPGAPGSPSYNIPSSYPSGPGTPGLPGSPGSPGQPGAPGLPGSSPYPKPSYPV
APGTPVSPGSPGSPGLPGQPGAPGLPGSSPYPKPSYPAAPGTPGSPGSPGSPGLPGKPGS
YVPQSSYPESAYPGTPGQPGQPGTPGLPGKPGASVIPSIPSYEKPQPTYQKPNVGYPGSP
GQPGTPGLPGSPGLPGTISYPKPTPTSAYPVGPGQSGYPGSPGLPGQPGTPGLPGSVYQP
SYQKPSSVNQYGNPSLYPVSSYPGSQGLPGTPGTPGQPGTPGSPGSAYPGSTLNQTPNYQ
SVKPSSSYPGSPGQPGTPGLPGQPGTPGIPSQPSYQKPNPPTYPSQPSYSGYPGSSGQPG
KPGTPGTPGTPGLPAGPTYQKPTPPAGYPGSPGTPGQPGTPGLPGIPAQSFGQYPQPSVD
YGKPNLSGYPGSTGQPGLPGQPGTPGTPGTPGSYPTSPKPSPYPINPGSGSVSGQPGTSG
IQSQPSYQKPNPPTYPVKPTYPSQPSYSGYPGSSGQPGKPGTPGTPGTPGTPGLPAGPSY
QKPTPPAGYPGSPGTPGQPGTPGLPGIPAQSFGQYPQPSVDYGKPNLSGYPGSTGQPGLP
GQPGTPGTPGTPGSYPTSPKPSPYPINPGSGSVSGQPGTLGIPSQPSYQKPNSPTYPSQP
SYSGYPGSSGQPGKPGTPGTPGTPGLPAGPSYQKPTPPAGYPGSPGTPGQPGTPGLPGIP
AQSFGQYPQPSVDYGKPNLSGYPGSTGQPGLPGQPGTPGTPGTPGSYPTSPKPSPSPINP
GSGSISGLPSNGYPSSIGQTQTGYPNKPIPQPSYPGQSYVYPTSYPQRPNVPDYGAQQPN
EYPGYLSSGYPVPPPPNAPLPNYPPPSSPSGYSGYFELYPGQNQIYPGQPDFNAYPAGDQ
YPFNGNAYGNPKQQFTSPATENKGKTPQITTPVATPTYGYKSESSQTSVEYPEKPSLIDI
RINVPNVPESNDGQKAVILGKNELIGTSSGSSGYSSSLTPQYVSSPTKAPKLPYQFGQES
NQVVLSSSKPETSTPFYSVSTKTASTPENTNLVQSTSTISYEDQFSTLSPDSSTPVNIIP
YPLPIVPNPGSCPCYFVPPTSNNSTNQIQQQQTTVDLNNLPEGAVIGFVPVVFYPSCGAG
SAVSKEVLSSKLNPVFPSAYQVPYKCSYCEQSESQTANIRSSFNQVIKQSQLNPSVVIKS
PSRKNYPNAPIYDQPEFGRKIKVVRRKTID
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcaacggaacggcaagatgattccgagaccgcgtacaaacatgtatttaata
ctgttctcaattttgggggttcagtttgccttatctcagcaaactaacccaaatgatttg
gaagtggtgcttaacatcgaagacagcaataaaactcaataccatgaacaaaatttcgat
accatggcctatatattcggctacgaagtaggtccaaatggtcaattccatcacgaaaat
aaaggtccagatggcttcacatatggttgctacggatatgtagacccagaaggaaaatta
caagcgactcattatatatctgatggctggggatacagagttgtcacaccaggtgaatct
gtagaaatattccatcataaacatgaccccgcagatgaaaatcaagctaatgaaagttct
gatggtggttctgaacatgaacatcatggacaccatggagtggtaacagcatggggtgat
ctttatttcccaaagggatgtggaggaggacgtccaattcaaggtactggtcaattaggt
ggatcaggctcatctggatacccaagctttattggagttggtcaaccaggaccagcaggc
gcacctggtcaaccaggtactccaggattaccgggaagtccatcttcagtttatccaagt
tatccaggatcacaaggatctccaggttctcccggtgctccgggtagcccaggactaccc
agtttaccatcttatcaaaaaccaacagtttatccaacatccacttatcctgggagctca
ggttccccaggctctccaggctccccaggttcacccggaactccaggcttaccaggtaaa
ccaggatctctaggctatccatcatatcaacaaccgtcaccttatccaagtgcaccaggc
tcgtctggtttaccgggaactccaggaactccaggaactccaggtcaaccaggtactcca
ggattaccgggaagtccatcttcagcttatccaagttatccaggatcacaaggatctcca
ggttctcccggtgctccgggtagcccaggactacccagtttaccatcttatcaaaaacca
acagtttatccaacatccacttatcctgggagctcaggttccccaggctctccaggctct
ccaggttcacccggaactccaggcttaccaggtaaaccaggatctctaggctatccatct
tatcaacaaccatcaccttatccaagtgcaccaggctcgtccggtttaccaggaactcca
ggaactccaggagctccaggaattccaggtgcaccaggatcaccttcatataacatacca
tcttcatacccaagtggtccaggaacaccagggttaccaggttcaccaggatcaccaggc
caaccaggagccccaggattaccaggttcttcaccatatccaaaaccttcataccctgta
gctccaggtacaccagtgtctccgggatctccaggttcccctggtcttccaggccaacca
ggagccccaggattaccaggttcttcaccatacccaaaaccttcataccctgcagctcca
ggtacaccagggtctccaggatctccaggttcccctggtcttccaggaaaaccaggatct
tacgttccccaatcttcatacccagaatctgcttatccaggtaccccaggtcaaccaggt
caaccaggaactccaggattaccaggtaaaccaggagcatcagttatacctagtataccg
tcatatgaaaaaccacaaccaacttaccaaaaaccaaatgtaggataccccggaagtcca
ggccaaccaggtactccaggtttaccaggatcaccaggattaccaggcacaatttcatac
ccaaaacccacaccaacatccgcatatcccgtaggaccaggtcaatcaggataccctggc
tctcccggacttccaggtcaaccaggaacaccaggtctacctgggtctgtataccaacct
tcatatcaaaaaccatcttctgttaatcaatatggaaatccatctctatatccagtatct
tcttatcctggaagtcaaggattacccggaacaccaggaacaccaggtcaacccggtaca
cctggatcaccaggctcagcttatccaggttctacattgaatcaaacgcctaattatcaa
tctgttaaaccaagttcttcatatccaggaagtccaggtcaaccaggcactccaggatta
ccaggtcaaccaggaactccaggtataccaagccagccttcttatcaaaaaccaaatcca
ccaacatatccttctcaaccatcttattccggttatcccggaagctcaggtcaaccagga
aaaccaggtactcctggtactccaggtacaccaggacttcccgcgggaccgacctaccaa
aaacctacacctcctgctggatatccaggatctcctggtacaccaggtcaaccaggaacc
cctggcctcccaggtattccagctcaatcatttggtcaatatcctcaaccttcagttgac
tatggaaaacctaatctatcaggatatcccggttctacaggtcaaccaggccttcccggt
caaccaggcactccaggaaccccaggaactccaggttcttatcccacttcaccaaaaccc
agcccataccccataaatccaggcagtggaagtgtatcaggtcaaccaggaacctcaggt
atacaaagtcagccatcttatcaaaaaccaaatccaccaacatacccagttaagcccaca
tatccttctcaaccatcttattccggttatcccggaagctcaggtcaaccaggaaaacca
ggtactcctggtactccaggtacaccaggtacaccaggacttcccgcgggaccgtcctac
caaaaacctacacctcctgctggatatccaggatcgcctggtacaccaggtcaaccagga
acccctggcctcccaggtattccagctcaatcttttggtcaatatcctcaaccttcagtt
gactatggaaaacctaatctatcaggatatcccggttctacaggtcaaccaggccttccc
ggtcaaccaggcactccaggaaccccaggaactccaggttcttatcccacttcaccaaaa
cccagcccataccccataaatccaggcagtggaagtgtatcaggtcaaccaggaactcta
ggtataccaagccagccttcttatcaaaaaccaaattcaccaacatatccttctcaacca
tcttattccggttatcccggaagctcaggtcaaccagggaaaccaggtactcctggtact
ccaggtacaccaggacttcccgcgggaccgtcctaccaaaaacctacacctcctgctgga
tatccaggatctcctggtacaccaggtcaaccaggaacccctggcctcccaggtattcca
gctcaatcatttggtcaatatcctcaaccttcagttgactatggaaaacctaatctatca
ggatatcccggttctacaggtcaaccaggccttcccggtcaaccaggcactccaggaacc
ccaggaactccaggttcttatcccacttcaccaaaacccagcccatctcccattaatcca
ggcagtggaagtatatcaggtttaccatccaatggttatccatcatcaattggtcaaacc
caaacaggttatccaaacaaacctattcctcaaccatcatacccgggtcagagttatgtt
tatcctaccagctatcctcaaagaccaaatgttcctgactatggagcacagcaaccaaat
gaatatcctgggtatttaagttcaggttacccagtaccccctccacctaacgcaccactt
cctaattacccaccacctagttcaccatctggttactctgggtatttcgaattgtacccg
ggtcaaaatcaaatataccccggtcaaccagattttaatgcatacccagctggtgatcaa
tatcctttcaacggaaacgcttatggtaatcctaaacaacaatttacttccccagcaaca
gaaaacaaaggtaaaacacctcaaataactactcctgttgctaccccaacatatggttat
aagagtgagtctagtcaaacttctgtggagtacccagaaaaacctagtttgatagatata
cgcattaatgtgccaaatgtacctgaatctaacgatggccaaaaagccgtaattttaggt
aaaaatgaattaataggaacatcgtcaggatcatctggatattccagttcacttactccg
caatacgtaagcagtcctacaaaggcacccaaattaccatatcaatttggtcaagaatca
aatcaggtagtcttatcatcaagcaaaccagaaaccagcactccattttatagtgtatcc
accaaaacagcatcgacacctgaaaatacaaatttagtgcaatcaactagtaccatatcc
tacgaagatcaatttagtactctttcaccggattcttcgacgcctgtcaatataattcct
tatccactaccaattgtgccaaacccaggatcttgtccatgttattttgttccaccaaca
agtaacaattctaccaatcaaatacaacaacaacaaacaacagttgacttaaataatctc
ccggagggtgctgttattggattcgtgccggtagtattttatccatcatgtggagcagga
agcgcagtatcaaaagaagtgctatcatctaagttaaatcccgttttcccttcggcttat
caagtaccatataaatgttcatattgtgaacaaagtgaatcacaaaccgcgaatatcaga
agcagtttcaatcaagtaataaaacaaagtcaattaaatccatctgttgtaattaaaagt
ccaagtaggaagaattacccaaatgccccaatttatgaccaaccagaatttggaagaaag
ataaaagttgtaagaaggaaaactatagattag
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