Acyrthosiphon pisum (pea aphid): 100168379
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Entry
100168379 CDS
T01076
Name
(RefSeq) collagen alpha-2(IV) chain isoform X12
Organism
api
Acyrthosiphon pisum (pea aphid)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Chitin_bind_4
Motif
Other DBs
NCBI-GeneID:
100168379
NCBI-ProteinID:
XP_001944912
APHIDBASE:
ACYPI009085
UniProt:
A0A8R2A526
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Position
A2:complement(80513026..80556089)
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AA seq
1650 aa
AA seq
DB search
MRLQRNGKMIPRPRTNMYLILFSILGVQFALSQQTNPNDLEVVLNIEDSNKTQYHEQNFD
TMAYIFGYEVGPNGQFHHENKGPDGFTYGCYGYVDPEGKLQATHYISDGWGYRVVTPGES
VEIFHHKHDPADENQANESSDGGSEHEHHGHHGVVTAWGDLYFPKGCGGGRPIQGTGQLG
GSGSSGYPSFIGVGQPGPAGAPGQPGTPGLPGSPSSVYPSYPGSQGSPGSPGAPGSPGLP
SLPSYQKPTVYPTSTYPGSSGSPGSPGSPGSPGTPGLPGKPGSLGYPSYQQPSPYPSAPG
SSGLPGTPGTPGTPGQPGTPGLPGSPSSAYPSYPGSQGSPGSPGAPGSPGLPSLPSYQKP
TVYPTSTYPGSSGSPGSPGSPGSPGTPGLPGKPGSLGYPSYQQPSPYPSAPGSSGLPGTP
GTPGAPGIPGAPGSPSYNIPSSYPSGPGTPGLPGSPGSPGQPGAPGLPGSSPYPKPSYPV
APGTPVSPGSPGSPGLPGQPGAPGLPGSSPYPKPSYPAAPGTPGSPGSPGSPGLPGKPGS
YVPQSSYPESAYPGTPGQPGQPGTPGLPGKPGASVIPSIPSYEKPQPTYQKPNVGYPGSP
GQPGTPGLPGSPGLPGTISYPKPTPTSAYPVGPGQSGYPGSPGLPGQPGTPGLPGSVYQP
SYQKPSSVNQYGNPSLYPVSSYPGSQGLPGTPGTPGQPGTPGSPGSAYPGSTLNQTPNYQ
SVKPSSSYPGSPGQPGTPGLPGQPGTPGIPSQPSYQKPNPPTYPSQPSYSGYPGSSGQPG
KPGTPGTPGTPGLPAGPTYQKPTPPAGYPGSPGTPGQPGTPGLPGIPAQSFGQYPQPSVD
YGKPNLSGYPGSTGQPGLPGQPGTPGTPGTPGSYPTSPKPSPYPINPGSGSVSGQPGTSG
IQSQPSYQKPNPPTYPVKPTYPSQPSYSGYPGSSGQPGKPGTPGTPGTPGTPGLPAGPSY
QKPTPPAGYPGSPGTPGQPGTPGLPGIPAQSFGQYPQPSVDYGKPNLSGYPGSTGQPGLP
GQPGTPGTPGTPGSYPTSPKPSPYPINPGSGSVSGQPGTLGIPSQPSYQKPNSPTYPSQP
SYSGYPGSSGQPGKPGTPGTPGTPGLPAGPSYQKPTPPAGYPGSPGTPGQPGTPGLPGIP
AQSFGQYPQPSVDYGKPNLSGYPGSTGQPGLPGQPGTPGTPGTPGSYPTSPKPSPSPINP
GSGSISGLPSNGYPSSIGQTQTGYPNKPIPQPSYPGQSYVYPTSYPQRPNVPDYGAQQPN
EYPGYLSSGYPVPPPPNAPLPNYPPPSSPSGYSGYFELYPGQNQIYPGQPDFNAYPAGDQ
YPFNGNAYGNPKQQFTSPATENKGKTPQITTPVATPTYGYKSESSQTSVEYPEKPSLIDI
RINVPNVPESNDGQKAVILGKNELIGTSSGSSGYSSSLTPQYVSSPTKAPKLPYQFGQES
NQVVLSSSKPETSTPFYSVSTKTASTPENTNLVQSTSTISYEDQFSTLSPDSSTPVNIIP
YPLPIVPNPGSCPCYFVPPTSNNSTNQIQQQQTTVDLNNLPEGAVIGFVPVVFYPSCGAG
SAVSKEVLSSKLNPVFPSAYQVPYKCSYCEQSESQTANIRSSFNQVIKQSQLNPSVVIKS
PSRKNYPNAPIYDQPEFGRKIKVVRRKTID
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctgcaacggaacggcaagatgattccgagaccgcgtacaaacatgtatttaata
ctgttctcaattttgggggttcagtttgccttatctcagcaaactaacccaaatgatttg
gaagtggtgcttaacatcgaagacagcaataaaactcaataccatgaacaaaatttcgat
accatggcctatatattcggctacgaagtaggtccaaatggtcaattccatcacgaaaat
aaaggtccagatggcttcacatatggttgctacggatatgtagacccagaaggaaaatta
caagcgactcattatatatctgatggctggggatacagagttgtcacaccaggtgaatct
gtagaaatattccatcataaacatgaccccgcagatgaaaatcaagctaatgaaagttct
gatggtggttctgaacatgaacatcatggacaccatggagtggtaacagcatggggtgat
ctttatttcccaaagggatgtggaggaggacgtccaattcaaggtactggtcaattaggt
ggatcaggctcatctggatacccaagctttattggagttggtcaaccaggaccagcaggc
gcacctggtcaaccaggtactccaggattaccgggaagtccatcttcagtttatccaagt
tatccaggatcacaaggatctccaggttctcccggtgctccgggtagcccaggactaccc
agtttaccatcttatcaaaaaccaacagtttatccaacatccacttatcctgggagctca
ggttccccaggctctccaggctccccaggttcacccggaactccaggcttaccaggtaaa
ccaggatctctaggctatccatcatatcaacaaccgtcaccttatccaagtgcaccaggc
tcgtctggtttaccgggaactccaggaactccaggaactccaggtcaaccaggtactcca
ggattaccgggaagtccatcttcagcttatccaagttatccaggatcacaaggatctcca
ggttctcccggtgctccgggtagcccaggactacccagtttaccatcttatcaaaaacca
acagtttatccaacatccacttatcctgggagctcaggttccccaggctctccaggctct
ccaggttcacccggaactccaggcttaccaggtaaaccaggatctctaggctatccatct
tatcaacaaccatcaccttatccaagtgcaccaggctcgtccggtttaccaggaactcca
ggaactccaggagctccaggaattccaggtgcaccaggatcaccttcatataacatacca
tcttcatacccaagtggtccaggaacaccagggttaccaggttcaccaggatcaccaggc
caaccaggagccccaggattaccaggttcttcaccatatccaaaaccttcataccctgta
gctccaggtacaccagtgtctccgggatctccaggttcccctggtcttccaggccaacca
ggagccccaggattaccaggttcttcaccatacccaaaaccttcataccctgcagctcca
ggtacaccagggtctccaggatctccaggttcccctggtcttccaggaaaaccaggatct
tacgttccccaatcttcatacccagaatctgcttatccaggtaccccaggtcaaccaggt
caaccaggaactccaggattaccaggtaaaccaggagcatcagttatacctagtataccg
tcatatgaaaaaccacaaccaacttaccaaaaaccaaatgtaggataccccggaagtcca
ggccaaccaggtactccaggtttaccaggatcaccaggattaccaggcacaatttcatac
ccaaaacccacaccaacatccgcatatcccgtaggaccaggtcaatcaggataccctggc
tctcccggacttccaggtcaaccaggaacaccaggtctacctgggtctgtataccaacct
tcatatcaaaaaccatcttctgttaatcaatatggaaatccatctctatatccagtatct
tcttatcctggaagtcaaggattacccggaacaccaggaacaccaggtcaacccggtaca
cctggatcaccaggctcagcttatccaggttctacattgaatcaaacgcctaattatcaa
tctgttaaaccaagttcttcatatccaggaagtccaggtcaaccaggcactccaggatta
ccaggtcaaccaggaactccaggtataccaagccagccttcttatcaaaaaccaaatcca
ccaacatatccttctcaaccatcttattccggttatcccggaagctcaggtcaaccagga
aaaccaggtactcctggtactccaggtacaccaggacttcccgcgggaccgacctaccaa
aaacctacacctcctgctggatatccaggatctcctggtacaccaggtcaaccaggaacc
cctggcctcccaggtattccagctcaatcatttggtcaatatcctcaaccttcagttgac
tatggaaaacctaatctatcaggatatcccggttctacaggtcaaccaggccttcccggt
caaccaggcactccaggaaccccaggaactccaggttcttatcccacttcaccaaaaccc
agcccataccccataaatccaggcagtggaagtgtatcaggtcaaccaggaacctcaggt
atacaaagtcagccatcttatcaaaaaccaaatccaccaacatacccagttaagcccaca
tatccttctcaaccatcttattccggttatcccggaagctcaggtcaaccaggaaaacca
ggtactcctggtactccaggtacaccaggtacaccaggacttcccgcgggaccgtcctac
caaaaacctacacctcctgctggatatccaggatcgcctggtacaccaggtcaaccagga
acccctggcctcccaggtattccagctcaatcttttggtcaatatcctcaaccttcagtt
gactatggaaaacctaatctatcaggatatcccggttctacaggtcaaccaggccttccc
ggtcaaccaggcactccaggaaccccaggaactccaggttcttatcccacttcaccaaaa
cccagcccataccccataaatccaggcagtggaagtgtatcaggtcaaccaggaactcta
ggtataccaagccagccttcttatcaaaaaccaaattcaccaacatatccttctcaacca
tcttattccggttatcccggaagctcaggtcaaccagggaaaccaggtactcctggtact
ccaggtacaccaggacttcccgcgggaccgtcctaccaaaaacctacacctcctgctgga
tatccaggatctcctggtacaccaggtcaaccaggaacccctggcctcccaggtattcca
gctcaatcatttggtcaatatcctcaaccttcagttgactatggaaaacctaatctatca
ggatatcccggttctacaggtcaaccaggccttcccggtcaaccaggcactccaggaacc
ccaggaactccaggttcttatcccacttcaccaaaacccagcccatctcccattaatcca
ggcagtggaagtatatcaggtttaccatccaatggttatccatcatcaattggtcaaacc
caaacaggttatccaaacaaacctattcctcaaccatcatacccgggtcagagttatgtt
tatcctaccagctatcctcaaagaccaaatgttcctgactatggagcacagcaaccaaat
gaatatcctgggtatttaagttcaggttacccagtaccccctccacctaacgcaccactt
cctaattacccaccacctagttcaccatctggttactctgggtatttcgaattgtacccg
ggtcaaaatcaaatataccccggtcaaccagattttaatgcatacccagctggtgatcaa
tatcctttcaacggaaacgcttatggtaatcctaaacaacaatttacttccccagcaaca
gaaaacaaaggtaaaacacctcaaataactactcctgttgctaccccaacatatggttat
aagagtgagtctagtcaaacttctgtggagtacccagaaaaacctagtttgatagatata
cgcattaatgtgccaaatgtacctgaatctaacgatggccaaaaagccgtaattttaggt
aaaaatgaattaataggaacatcgtcaggatcatctggatattccagttcacttactccg
caatacgtaagcagtcctacaaaggcacccaaattaccatatcaatttggtcaagaatca
aatcaggtagtcttatcatcaagcaaaccagaaaccagcactccattttatagtgtatcc
accaaaacagcatcgacacctgaaaatacaaatttagtgcaatcaactagtaccatatcc
tacgaagatcaatttagtactctttcaccggattcttcgacgcctgtcaatataattcct
tatccactaccaattgtgccaaacccaggatcttgtccatgttattttgttccaccaaca
agtaacaattctaccaatcaaatacaacaacaacaaacaacagttgacttaaataatctc
ccggagggtgctgttattggattcgtgccggtagtattttatccatcatgtggagcagga
agcgcagtatcaaaagaagtgctatcatctaagttaaatcccgttttcccttcggcttat
caagtaccatataaatgttcatattgtgaacaaagtgaatcacaaaccgcgaatatcaga
agcagtttcaatcaagtaataaaacaaagtcaattaaatccatctgttgtaattaaaagt
ccaagtaggaagaattacccaaatgccccaatttatgaccaaccagaatttggaagaaag
ataaaagttgtaagaaggaaaactatagattag
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