Acyrthosiphon pisum (pea aphid): 100169094
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Entry
100169094 CDS
T01076
Name
(RefSeq) pre-mRNA-splicing factor RBM22
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100169094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100169094
Spliceosome [BR:
api03041
]
Complex B
Other components
Prp19-related factors
100169094
Complex C
100169094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
Torus
zf_CCCH_4
zf-CCCH_2
RRM_occluded
zf-CCCH_4
zf-CCCH
RRM_YTH1
RRM_3
zf-CCCH_10
Nup35_RRM_2
zf-CCCH_PARP12
zf-CCCH_DUS3L
Motif
Other DBs
NCBI-GeneID:
100169094
NCBI-ProteinID:
XP_001943081
APHIDBASE:
ACYPI009745
UniProt:
A0A8R1VYC3
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Position
A2:38511232..38514159
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AA seq
381 aa
AA seq
DB search
MSLSKTTNTYNRQNWEDSDFPIVCETCLGDSPYLRMAKEKYGKECEVCARPFTVFRWCPG
ARMRFKKTEICQTCARLRNACQTCLLDLEYGLPLQVRDAALKIKEQIPKSDVNKEYFVQN
MDSELAKMDEAGGKCQNASDVLAKMARKAPYYERNRPHICSFWVKGECRRGEECPYRHER
PTDPEDPLSNQNFKDRYYGVNDPVAEKMMNRASEMPKLEKPEDQTITTLYVGNLNDITTE
KDLRDVFYQYGEIRNITHVAHQNCAFIQYTTRAAAEMGAESTYGRLTLGGHKLNVRWGHA
QARKDKETTSIAAMKETKMKPSPGLPAPLPPLPTELQNNFFNIAPQAVPVVATPFIPVMP
ALPHPSMQYMSTPLYPPGTSK
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtcaaaaacgacaaacacgtacaaccgacagaattgggaagactccgacttt
ccaattgtttgtgaaacatgtttaggagatagcccttacttgcgaatggcaaaagaaaaa
tatggcaaagagtgcgaagtttgtgcgaggccattcacagtattccgttggtgcccaggc
gctagaatgcgtttcaagaaaactgaaatatgtcaaacttgtgcacggctaagaaatgct
tgccagacatgtttattggatctcgaatatggacttcctttacaagttcgtgatgctgca
ttaaaaattaaagaacaaattcccaagtctgatgttaataaggaatattttgttcaaaat
atggattctgaactagctaaaatggatgaagctggaggaaaatgtcagaatgctagtgac
gtactggccaaaatggctcgcaaagctccttactatgaacgtaatcggccacatatttgt
tcattttgggtgaaaggtgaatgtcgccgaggagaagaatgtccatatcgtcatgaaaga
cctacagacccagaggatccactatcaaatcaaaatttcaaagacagatattatggtgtg
aatgatcctgttgccgagaaaatgatgaacagagccagtgaaatgccaaaactggagaaa
ccagaggatcaaacaatcacaacactttatgttggcaacctgaatgatataactacagaa
aaagatttgagggatgtattttatcaatatggagaaatacgaaacattactcatgtagct
catcagaattgtgcattcattcagtataccacacgagctgcagccgaaatgggagctgag
agcacttatggtcgtttgacattgggtggacataaattgaatgtacgttggggtcatgct
caagcacgtaaagataaggaaactactagtatagcggccatgaaagaaaccaaaatgaaa
ccttcgccaggattacctgctccattaccaccattgcctacggaactacaaaacaatttt
ttcaacattgctcctcaagccgtgcctgtcgttgctacaccttttatacctgtcatgcca
gcattacctcatccgagtatgcagtacatgtcaacacccctttacccacccggtacaagc
aaatga
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