KEGG   Acyrthosiphon pisum (pea aphid): 100169094
Entry
100169094         CDS       T01076                                 
Name
(RefSeq) pre-mRNA-splicing factor RBM22
  KO
K12872  pre-mRNA-splicing factor RBM22/SLT11
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100169094
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:api03041]
    100169094
Spliceosome [BR:api03041]
 Complex B
  Other components
   Prp19-related factors
    100169094
 Complex C
    100169094
SSDB
Motif
Pfam: STL11_N zf-CCCH_RBM22 RRM_1 Torus zf_CCCH_4 zf-CCCH_2 RRM_occluded zf-CCCH_4 zf-CCCH RRM_YTH1 RRM_3 zf-CCCH_10 Nup35_RRM_2 zf-CCCH_PARP12 zf-CCCH_DUS3L
Other DBs
NCBI-GeneID: 100169094
NCBI-ProteinID: XP_001943081
APHIDBASE: ACYPI009745
UniProt: A0A8R1VYC3
LinkDB
Position
A2:38511232..38514159
AA seq 381 aa
MSLSKTTNTYNRQNWEDSDFPIVCETCLGDSPYLRMAKEKYGKECEVCARPFTVFRWCPG
ARMRFKKTEICQTCARLRNACQTCLLDLEYGLPLQVRDAALKIKEQIPKSDVNKEYFVQN
MDSELAKMDEAGGKCQNASDVLAKMARKAPYYERNRPHICSFWVKGECRRGEECPYRHER
PTDPEDPLSNQNFKDRYYGVNDPVAEKMMNRASEMPKLEKPEDQTITTLYVGNLNDITTE
KDLRDVFYQYGEIRNITHVAHQNCAFIQYTTRAAAEMGAESTYGRLTLGGHKLNVRWGHA
QARKDKETTSIAAMKETKMKPSPGLPAPLPPLPTELQNNFFNIAPQAVPVVATPFIPVMP
ALPHPSMQYMSTPLYPPGTSK
NT seq 1146 nt   +upstreamnt  +downstreamnt
atgtcgttgtcaaaaacgacaaacacgtacaaccgacagaattgggaagactccgacttt
ccaattgtttgtgaaacatgtttaggagatagcccttacttgcgaatggcaaaagaaaaa
tatggcaaagagtgcgaagtttgtgcgaggccattcacagtattccgttggtgcccaggc
gctagaatgcgtttcaagaaaactgaaatatgtcaaacttgtgcacggctaagaaatgct
tgccagacatgtttattggatctcgaatatggacttcctttacaagttcgtgatgctgca
ttaaaaattaaagaacaaattcccaagtctgatgttaataaggaatattttgttcaaaat
atggattctgaactagctaaaatggatgaagctggaggaaaatgtcagaatgctagtgac
gtactggccaaaatggctcgcaaagctccttactatgaacgtaatcggccacatatttgt
tcattttgggtgaaaggtgaatgtcgccgaggagaagaatgtccatatcgtcatgaaaga
cctacagacccagaggatccactatcaaatcaaaatttcaaagacagatattatggtgtg
aatgatcctgttgccgagaaaatgatgaacagagccagtgaaatgccaaaactggagaaa
ccagaggatcaaacaatcacaacactttatgttggcaacctgaatgatataactacagaa
aaagatttgagggatgtattttatcaatatggagaaatacgaaacattactcatgtagct
catcagaattgtgcattcattcagtataccacacgagctgcagccgaaatgggagctgag
agcacttatggtcgtttgacattgggtggacataaattgaatgtacgttggggtcatgct
caagcacgtaaagataaggaaactactagtatagcggccatgaaagaaaccaaaatgaaa
ccttcgccaggattacctgctccattaccaccattgcctacggaactacaaaacaatttt
ttcaacattgctcctcaagccgtgcctgtcgttgctacaccttttatacctgtcatgcca
gcattacctcatccgagtatgcagtacatgtcaacacccctttacccacccggtacaagc
aaatga

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