Acyrthosiphon pisum (pea aphid): 100169363
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Entry
100169363 CDS
T01076
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100169363
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100169363
Enzymes [BR:
api01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
100169363
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
100169363
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
MMR_HSR1
ATP_bind_1
RsgA_GTPase
AAA_22
TniB
AAA_29
CbiA
Motif
Other DBs
NCBI-GeneID:
100169363
NCBI-ProteinID:
XP_001946108
APHIDBASE:
ACYPI009989
UniProt:
A0A8R2A6D4
LinkDB
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Position
A2
Genome browser
AA seq
430 aa
AA seq
DB search
MSESVEVQIEDQEFQLEPDNELRFEVENKNETVVLELKTGLAEIFGTELVKGKSYTFYFG
AKIAVFTWQGCSLKLRGKKGISYISKETPMMFYLNCHASLEQLRVKSEKEKIRGPVTMVV
GPTDVGKSTLCRILLNYSARMNALGRRPIYVDLDPGQGQISVPGTIGAVMVERPAEVEES
FSQAAPLVYHYGHTNMSINSTLYNTLISRMAEVIHQRMDENPRINCSGLIINTCGWVKGK
GYQHLTHIALAFEVDVILVLDQERLYNELVRDMPIFVKVVLLPKSGGVVERSNKFRLEGR
EARIREYFYGSPRNVLHPHTCEVRFSDIKVYRIGAPPIPNTLMPLDMQKTDLETKLEPVT
PGPNMMHHVLALSFSTVVEEDVVRTSVAGFVCVTNVDTSRQMLTLLSPQPKPLPETIYLM
SDVQFMDNNA
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagagtgtagaagttcaaattgaagaccaggaattccaattggaacctgacaat
gaacttagatttgaagttgaaaacaaaaatgaaacagttgtgttagaattgaaaactggg
ctagcagaaatttttggaacagaattagtgaaaggtaaatcatatacgttttattttgga
gctaaaattgcggtgtttacatggcaggggtgttcattaaaattacgaggaaaaaaagga
attagttatatatccaaagagaccccaatgatgttttatttaaattgtcatgcatcatta
gaacaactacgagtaaaatcagaaaaagaaaagataagaggccctgttacaatggtggtt
ggaccgactgatgtgggtaaatctactctttgtagaatactactaaattatagtgcacga
atgaatgctcttggccgtagacccatctatgttgacctggacccgggtcagggacaaata
tcagttccaggaacaattggagcagtcatggtagaaaggccagctgaagtagaagaaagt
ttctcccaagcagctccactagtctatcattatggacatacaaacatgagcattaattca
actttgtacaacactttaatttctcgtatggcagaagttattcatcaacgaatggatgaa
aatcctagaattaactgttctggattaataattaacacatgcggttgggtaaaaggtaaa
ggttaccagcatttaactcacattgcactcgcttttgaagttgatgttattcttgtactt
gatcaagaacgattatataatgaactagtgagagatatgccaatatttgtcaaagttgtt
cttttaccaaaaagtggaggagtagttgaaagaagtaataagtttagattggaaggtaga
gaggcacgaattcgagaatacttttacggtagtcctaggaatgtacttcatccacacacc
tgtgaagtaaggttttccgacataaaagtatatagaattggagcgccacccattccaaat
acattgatgccattagatatgcaaaaaactgatttagagacaaaacttgaacctgttact
ccagggccaaatatgatgcatcatgtgttagctttgagtttcagtacagtggtagaagaa
gacgttgttaggactagtgttgctggttttgtctgcgtaacaaatgttgacacctcacga
caaatgttaactctattgtcacctcaaccaaaacccctgcctgaaacaatttacctcatg
tcggatgtacaattcatggacaacaatgcttga
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