KEGG   Acyrthosiphon pisum (pea aphid): 100169389
Entry
100169389         CDS       T01076                                 
Name
(RefSeq) exosome complex component RRP42
  KO
K12589  exosome complex component RRP42
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    100169389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100169389
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     100169389
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     100169389
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 100169389
NCBI-ProteinID: XP_001952675
APHIDBASE: ACYPI010014
UniProt: A0A8R1W3V4
LinkDB
Position
A2:86917040..86920314
AA seq 289 aa
MSLVSLNEAEKVYIIHGVEENFRCDGRSRQDYRPLELEMDIVSNANGSARLRLANSDILV
CVKVEIDTPLPEAPKDGKIEYFVDCSANATPAFEGRGGEHLAAELSRFLCLAHGPVFNLS
KLCIVPGQSCWKLFVDVLILECGGNLFDAVSLAAKAALCNTSLPNIVGTYEDGQNIDLQI
SDDPFDTKPLEASDLPVLVSLCKIGNSYVADPTIEEEICGAGCIVVSVTPKGNVTAVLKK
GAGSFMPDTLNEIIMSGSHIGILLNKALNETLIQDMSSNVCKQQYGFLK
NT seq 870 nt   +upstreamnt  +downstreamnt
atgagtttggtgtcattgaacgaggcggaaaaggtgtacattattcacggagttgaggaa
aatttccgatgtgacggacgtagtcgacaagactacaggccattggaattggaaatggac
attgtgagcaacgctaatgggtcagctcgcttgcgattagccaactctgatattttagtg
tgcgtaaaagtggagattgacactccacttccagaagcacctaaagatggcaaaatagaa
tattttgtcgattgttcggccaacgcaactccagcatttgaaggacgtggcggtgaacat
ttagctgctgaactcagtcgctttctttgcttagctcatggcccagtatttaacttgagt
aaattgtgtattgttcctggacaatcatgttggaaattgtttgtcgatgttctgatctta
gaatgtggaggaaacttatttgatgccgtatcattggcagctaaagctgctttgtgtaac
acaagtctaccaaatattgtggggacatacgaggatggccaaaatatcgatcttcagata
tctgatgatccattcgatacaaaaccactagaggccagtgacttacctgtcttggtgtcc
ttgtgcaaaattggcaacagttatgtggctgatcctacaatagaggaggaaatatgtggt
gcaggatgtattgtcgtatcagtcacgcccaaaggaaacgtaacggctgtattaaaaaaa
ggagccggaagctttatgccggatacgttaaacgaaatcattatgtctggttcacacatt
ggtattctgttgaataaagcgctcaatgaaactcttattcaagacatgtccagtaatgtt
tgtaagcaacaatatggtttccttaaatga

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