Acyrthosiphon pisum (pea aphid): 100169618
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Entry
100169618 CDS
T01076
Name
(RefSeq) probable cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100169618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100169618
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100169618
U7-dependent histone pre-mRNA processing factors
100169618
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
Beta-Casp
CPSF100_C
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Baculo_FP_2nd
MJ1278
Motif
Other DBs
NCBI-GeneID:
100169618
NCBI-ProteinID:
XP_001951701
APHIDBASE:
ACYPI010221
UniProt:
A0A8R1W5P6
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Position
X
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AA seq
729 aa
AA seq
DB search
MTSIIKFYTLSGAHNESPPCYLLQIDEFKFLLDCGWDERFSMGVVNKLKRYIHQIDAVLL
SHPDRFHLGILPYLVGKCGLNCPVYATIPVYQMGQMFMYDLHQSLCNAEDFDLFNLDDVD
AAFDKVIQVKYNQIVSLKGKGIGLRIVALPAGHMVGGTIWRISKVGEEDIVYAVDFNHKK
ERHLNGSDLERLGRPSLLILDCFNAAYSQPRRRSRDEALMTCILTTLRAKGNVLMAIDTA
GRVLELMHMLDQLWRNKESGLGVYSLVFLTNVSYNTVEFAKSQIEWMSDKLMKSFEGARN
NPFFFKHVKLCHNMNDLNKVSEPKVVLASNGDLESGFSREVFIMWASNSKNSIILTDRTA
PGTLARDLIDEGGDRNIKLIVKKRVPLDDNELEEYNIKHDEEKMEASKIDPVSSDSEDEQ
EVMRGKYDLLVDADTLSSKKSSKKEFPPMFPYYEEKCKFDPYGEIIKQEDFIKFDVAPGD
KPTVDEQNKKSDEDEEEDLNDVPSKCVEYEQNIYVAAKIVHIDFEGRSDGESIKQIVLAL
KPRRLILVRGNPYSTKVVYNFAKVFIDGKVFTPRIGQCLNVTTESHIYQVRLTDALLSKI
NFKKGPNGDLAYMNAKLKLNSRDTVMEVDNVVSEKMPRIDDQIFTLEPLAEHEIHPRKTV
FINRLKLSDFKQILSKNNIPCELSKGVLWCCNRTVCVRRNSSGKVLMEGIISRQYYYIRS
LLYSQFIII
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaataataaaattttataccttgtcgggtgcgcacaatgaatcgccaccatgc
tatttattacaaattgacgagtttaagttcttgttggactgtggatgggatgaacgcttt
agcatgggagttgtgaataaattaaaaaggtatatccatcaaatagatgcagttttatta
tcgcacccggatcgttttcatcttggaattttgccgtacctcgttggcaaatgtggttta
aactgccctgtctatgctactatacctgtttaccaaatgggtcaaatgtttatgtatgat
ttacatcaatctttgtgcaatgcggaagattttgatttatttaatttagatgatgtggat
gctgctttcgataaagtcatacaagtaaaatataatcaaattgtttcattgaaaggtaaa
ggaattggtttaagaatagtagcattgcctgctggccatatggttggcggtacaatttgg
agaatatctaaggttggcgaagaggatattgtttatgctgtagattttaatcataaaaaa
gaaagacatttgaatggcagtgatttagagaggctgggaagaccatcattactaatattg
gattgttttaatgctgcttattcacaacccaggcgtagatctcgcgatgaagctttaatg
acttgtatattgacaacattacgtgccaaaggcaatgttttgatggcgattgatacagca
ggacgtgttttagaattgatgcatatgctggaccaactgtggcgtaataaagaatctggt
cttggtgtgtactcattagtatttttaacaaatgtcagctacaatactgtagaattcgca
aagtctcaaattgaatggatgagtgataaattgatgaaaagttttgaaggtgcaaggaat
aatccatttttttttaagcatgtaaaactatgtcataacatgaatgatttaaacaaagtc
tccgaaccaaaagttgtattagctagcaatggagatcttgaaagtggattttcaagagaa
gtttttattatgtgggcttcaaactccaaaaacagtattattcttacagacagaactgct
cctggtacattagctcgcgatttaattgatgaaggtggtgatagaaatattaaattgatt
gtcaagaaacgtgtacctttagatgacaatgagttggaagaatataatataaaacatgac
gaagaaaaaatggaagccagtaaaattgacccagtaagttctgattctgaagacgaacaa
gaagttatgagaggcaaatatgacttattagtagatgctgatacattaagctccaaaaaa
tcttcaaaaaaagaatttcctcctatgtttccttattatgaagaaaaatgcaaatttgac
ccatatggggaaattataaaacaagaagattttattaaatttgatgtagcaccgggagac
aaaccaaccgtagatgaacaaaataaaaaaagtgatgaagatgaagaagaagatttaaat
gacgttccgtcaaagtgtgtggagtatgaacaaaacatttatgtggcagccaaaattgta
cacattgattttgaaggtcgctcagacggagaatcaataaaacaaattgtacttgcatta
aaacctagacgtttgattttagtaagaggcaacccatacagtactaaagttgtttacaac
tttgccaaagtatttatagatggtaaagtttttacacctagaattggacaatgtttgaac
gtaacaactgaatctcatatataccaagtacgtttaacagatgcacttctttccaaaatt
aattttaaaaaaggaccaaatggtgatttagcttacatgaacgccaaattaaaattaaat
agtcgtgatactgttatggaagtggacaatgttgtatctgaaaagatgccgagaatagat
gatcaaatatttacacttgaacctttagcagaacatgaaattcatcctcgcaagaccgtg
tttattaaccgtttaaaactgtcagattttaaacagattttatccaaaaataatatacct
tgtgagctttctaaaggtgttttatggtgctgtaatcgaactgtatgtgttcgtagaaat
tcttctggaaaggttttgatggaaggaataattagccgtcaatactattacatacgtagt
ttattatacagccagtttattatcatttaa
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