Acyrthosiphon pisum (pea aphid): 100573308
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Entry
100573308 CDS
T01076
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit CG7185-like
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
api03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100573308
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
100573308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100573308
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
100573308
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
100573308
NCBI-ProteinID:
XP_029344699
UniProt:
A0A8R2NP75
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Position
X:complement(69613514..69619748)
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AA seq
391 aa
AA seq
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MEHTIDIDQYRYNRNMDRLGTHYKKDEFMTTHDTHFTDYFKLSSNDNSQAYGHIYGMTKK
TKNFYQLFIGNLTWWTTDQDIIDSIIGTGVHDFVDIKFFENRGNGQFKGFCTVTLESEKS
VKQILKKLPNELIHGRKPVVTFPSLRAYFMFESEFETQFNKSSKGDMSRTPGDNSLENPL
QSVSYNIRTPPTSCIQTHHQYPQTTGYENQWNISYQQNMGAYFVTSEQGISGAGGSLSQI
NQSDHCQESVDPTLVNQTSTSLKSQSFSYDDYHPFYTHSYEPRKTNEIEKTETETEINFI
INRNRIVSSSAIARAVTDATNGEYVSAIETLNTAIALIEDSKIANDERSKILVCTLYNTI
YGIQNRMVNKWKEFCRSPSNRLYRKPKREHT
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggagcatacaattgacatagaccagtaccgttacaaccgaaacatggatcgactaggt
acccattacaaaaaggatgaatttatgacaactcatgatacgcattttactgattacttc
aaacttagttccaacgataattcacaggcatatggtcatatttatggcatgacaaagaaa
acaaaaaatttttaccaattattcattggcaatttgacttggtggacaacagatcaagac
ataattgactctataatcggcactggagtgcatgattttgttgatattaaatttttcgaa
aatcgaggaaatggccaattcaaagggttttgtactgttacattagaatcagagaaaagt
gtaaaacagattttaaagaaattaccaaatgaacttatccatggacgaaaacctgttgtt
acatttccatctttaagagcatattttatgtttgaatcagaatttgaaactcagttcaat
aaatcttctaagggggatatgtctagaacccctggtgataattcattagaaaacccatta
caaagtgtgtcttataatataagaacaccaccgactagctgtatacaaacccaccaccag
tatccacaaaccacaggttatgaaaaccaatggaacatatcatatcaacaaaatatggga
gcatattttgtcacatcagaacaaggtatatcgggagctggaggttcacttagtcaaata
aatcaaagtgatcattgtcaagaatcagttgatcctacactagtcaatcaaaccagtaca
tctctaaagtctcaaagcttttcatatgatgattatcatcccttttatacacattcttat
gaacctcgcaaaacaaatgaaatagaaaagacagaaacagaaacagaaataaacttcatt
attaacaggaatagaattgtgtctagttctgctatagcacgagctgtaactgatgctact
aacggtgagtacgtcagtgctatagaaactttgaatacagcaatagcattaatcgaagat
tctaagattgctaatgacgagcgcagtaaaatattagtgtgtactttgtataacacaata
tatggaattcaaaataggatggttaataaatggaaagagttctgtagatcaccttcgaat
agattatacagaaagccaaaacgtgaacacacttaa
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