Acyrthosiphon pisum (pea aphid): 100573542
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Entry
100573542 CDS
T01076
Name
(RefSeq) cleavage stimulation factor subunit 1-like
KO
K14406
cleavage stimulation factor subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100573542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100573542
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100573542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
CSTF1_dimer
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_HPS5
eIF2A
Beta-prop_Vps41
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Cytochrom_D1
VPS8_N
Beta-prop_NWD2_C
Beta-prop_WDR11_1st
DUF5899
Mcl1_mid
Motif
Other DBs
NCBI-GeneID:
100573542
NCBI-ProteinID:
XP_003245691
UniProt:
A0A8R2A608
LinkDB
All DBs
Position
X:complement(120959191..120961503)
Genome browser
AA seq
433 aa
AA seq
DB search
MSDMNNCKPEMCIKNKDNLYRLIISQLLYDGHSIIASMLAAQVNADPPCSPSDRLMSVVT
KGLQHETYRQKETEQALNLNPIQQMLIGPGIDLEFETNVFCTAPEPSLYETIYVTAHKGP
CIAGAFSPDGQLIATGSSDASIKILDVERMLAKSHDIGSTDNQEGQGHPVIRTLYDHLEE
VTCLEFHPTKPILTSGSRDGHVKLFDYSKTSVRKALKTIIDVEPITCISFHPGGDYMVMG
TNSPIIRFYDINTVQCYVCSVPSHQHTGPVTSIKYEPGARYFVSSSRDGSIKLWDGVSNK
CVNTFDKAHDGSQVCSVTFSRNGKYILSSGKDSLVKLWELSTSRCLVIYTGAGTTGKQVH
RTQALFNHTEEYVMFPDEATTSLCAWNARNASRQQLLSLGHKGPIRSIVHSPNSTAFLTC
SDDFRARFWYKRH
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatatgaataattgcaaacctgaaatgtgtattaagaataaagataatttatac
aggctcataataagtcaactcttatatgatggtcattccataattgcatcaatgttagct
gcccaagtaaacgctgatccaccttgttctccatcggatcgactcatgagtgtagtgaca
aaaggtttacaacatgaaacctatagacaaaaagaaaccgaacaagcattaaacttaaat
ccaattcagcaaatgttaattggaccaggcattgacttagaatttgaaactaatgttttt
tgtactgctcctgaaccgtcgctgtatgaaactatatatgtaacagcccacaaaggaccc
tgcatagctggtgcatttagtccagatggtcagttaattgcaacaggcagcagtgatgca
tcaataaaaattttggatgttgaaagaatgttggctaaatcacatgatattggcagtact
gataatcaagaaggacaaggtcatccagtaatccggactttgtatgatcatctggaagaa
gtgacatgcttagagttccaccctaccaagccaattttgacttcgggctctcgagatggt
catgttaaactttttgattattcaaaaacatctgttaggaaagccttaaagacaattatc
gatgtcgaacctataacatgtataagttttcatcctggtggagactatatggtaatgggt
accaatagcccaatcataaggttttatgatataaatacagttcaatgttatgtttgttca
gttcctagtcatcaacatactggacctgttacatcaataaagtatgaaccaggtgccagg
tattttgtgtcttctagtcgagatggttcaattaaattgtgggacggtgtgtctaataaa
tgtgttaacacatttgataaagcacatgatggaagtcaagtgtgttctgtgacattttca
agaaatggaaagtacatcttatcatcaggcaaagattctttagtgaaactttgggagtta
tccactagtagatgtctggtgatatatactggagcaggaacaactggaaaacaagtacat
cgtacacaagcattgtttaatcataccgaggagtatgtcatgtttccagatgaagccact
acatctttgtgcgcatggaatgcacgcaatgcttctcggcagcaacttttatctctaggc
cataaaggacctattcgttcaattgtgcattccccaaattcaacagcatttttgacttgt
tcagacgactttagagcccgtttttggtataaaagacactag
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