KEGG   Acyrthosiphon pisum (pea aphid): 100573542
Entry
100573542         CDS       T01076                                 
Name
(RefSeq) cleavage stimulation factor subunit 1-like
  KO
K14406  cleavage stimulation factor subunit 1
Organism
api  Acyrthosiphon pisum (pea aphid)
Pathway
api03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:api00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100573542
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:api03019]
    100573542
Messenger RNA biogenesis [BR:api03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100573542
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_IFT122_1st WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta CSTF1_dimer Beta-prop_WDR36-Utp21_1st WDR55 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_NOL10_N Beta-prop_EML Beta-prop_Aladin WD40_MABP1-WDR62_2nd CFAP251_N WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C ASA1 Beta-prop_DCAF4 Beta-prop_IFT140_1st PAC11 DSE1_N WD40_RFWD3 Beta-prop_EIPR1 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_HPS5 Beta-prop_Vps41 eIF2A Beta-prop_WDR35_TULP_N Cytochrom_D1 Beta-prop_NWD2_C Beta-prop_WDR11_1st DUF5899 Mcl1_mid
Other DBs
NCBI-GeneID: 100573542
NCBI-ProteinID: XP_003245691
UniProt: A0A8R2A608
LinkDB
Position
X
AA seq 433 aa
MSDMNNCKPEMCIKNKDNLYRLIISQLLYDGHSIIASMLAAQVNADPPCSPSDRLMSVVT
KGLQHETYRQKETEQALNLNPIQQMLIGPGIDLEFETNVFCTAPEPSLYETIYVTAHKGP
CIAGAFSPDGQLIATGSSDASIKILDVERMLAKSHDIGSTDNQEGQGHPVIRTLYDHLEE
VTCLEFHPTKPILTSGSRDGHVKLFDYSKTSVRKALKTIIDVEPITCISFHPGGDYMVMG
TNSPIIRFYDINTVQCYVCSVPSHQHTGPVTSIKYEPGARYFVSSSRDGSIKLWDGVSNK
CVNTFDKAHDGSQVCSVTFSRNGKYILSSGKDSLVKLWELSTSRCLVIYTGAGTTGKQVH
RTQALFNHTEEYVMFPDEATTSLCAWNARNASRQQLLSLGHKGPIRSIVHSPNSTAFLTC
SDDFRARFWYKRH
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagtgatatgaataattgcaaacctgaaatgtgtattaagaataaagataatttatac
aggctcataataagtcaactcttatatgatggtcattccataattgcatcaatgttagct
gcccaagtaaacgctgatccaccttgttctccatcggatcgactcatgagtgtagtgaca
aaaggtttacaacatgaaacctatagacaaaaagaaaccgaacaagcattaaacttaaat
ccaattcagcaaatgttaattggaccaggcattgacttagaatttgaaactaatgttttt
tgtactgctcctgaaccgtcgctgtatgaaactatatatgtaacagcccacaaaggaccc
tgcatagctggtgcatttagtccagatggtcagttaattgcaacaggcagcagtgatgca
tcaataaaaattttggatgttgaaagaatgttggctaaatcacatgatattggcagtact
gataatcaagaaggacaaggtcatccagtaatccggactttgtatgatcatctggaagaa
gtgacatgcttagagttccaccctaccaagccaattttgacttcgggctctcgagatggt
catgttaaactttttgattattcaaaaacatctgttaggaaagccttaaagacaattatc
gatgtcgaacctataacatgtataagttttcatcctggtggagactatatggtaatgggt
accaatagcccaatcataaggttttatgatataaatacagttcaatgttatgtttgttca
gttcctagtcatcaacatactggacctgttacatcaataaagtatgaaccaggtgccagg
tattttgtgtcttctagtcgagatggttcaattaaattgtgggacggtgtgtctaataaa
tgtgttaacacatttgataaagcacatgatggaagtcaagtgtgttctgtgacattttca
agaaatggaaagtacatcttatcatcaggcaaagattctttagtgaaactttgggagtta
tccactagtagatgtctggtgatatatactggagcaggaacaactggaaaacaagtacat
cgtacacaagcattgtttaatcataccgaggagtatgtcatgtttccagatgaagccact
acatctttgtgcgcatggaatgcacgcaatgcttctcggcagcaacttttatctctaggc
cataaaggacctattcgttcaattgtgcattccccaaattcaacagcatttttgacttgt
tcagacgactttagagcccgtttttggtataaaagacactag

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