Acyrthosiphon pisum (pea aphid): 100573622
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Entry
100573622 CDS
T01076
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100573622
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100573622
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100573622
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
CSTF1_dimer
WDR55
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_IFT140_1st
Beta-prop_EIPR1
WD40_RFWD3
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_SPT8
eIF2A
Beta-prop_Vps41
Beta-prop_VPS8
VPS8_N
Ge1_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NWD2_C
Cytochrom_D1
Beta-prop_WDR11_1st
Mcl1_mid
DUF5899
Motif
Other DBs
NCBI-GeneID:
100573622
NCBI-ProteinID:
XP_003241781
UniProt:
A0A8R1W4M0
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All DBs
Position
A2:complement(48530167..48533134)
Genome browser
AA seq
438 aa
AA seq
DB search
MRSDINNCKPEMCIKNRDHLYRLIISQLFYDGHSTIASSLAAQVNADPPCSPSDRLMSVV
TKGLQHETDRQKESEQALNLNPIQQMLIGPGIDLEFETNVMCTAPEPSLYETVYVTSHKG
ACRAGAFSPDGQLIATGSSDASIKILDVERMLAKAHDIGSTDNQEGQGHPVIRTLYDHLE
EVTCLEFHPNKPILASGSRDCHVKLFDYSKTSVKKAFKTINDVEPITCISFHPLGDFIVM
GTNSPVIRLYDINTVQCYVCSLPSHQHTGPVTSIKYEPSARYFVSSSRDGSIKLWDAVSN
KCVNTFEKAHDGSQVCSVTFSRNGKYILSSGKDSLVKLWELSTSRCLIAYTGAGTTGKQE
HRTQALFNHTEEYVMFPDEATTSLCAWNARNASRQQLLSLGHNGPIRSIVHSPNSAAFLT
CSDDFRARFWYRKHLIGA
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtgatataaataattgcaaacctgaaatgtgtattaagaatagagatcattta
tacagactcataataagtcaactcttttatgatggtcattccaccattgcttcaagctta
gctgcccaagtaaacgctgatccaccttgttctccatcggatcgactcatgagtgtagtg
acaaaaggtttacaacatgaaaccgatagacaaaaagaatctgaacaagcattaaactta
aatccaattcagcaaatgttaattggaccaggcattgacttagaatttgaaactaatgtt
atgtgtactgctcctgaaccgtcgctgtatgaaactgtgtatgtaacatcccacaaagga
gcctgtagggctggtgcatttagtcctgatggacagttaatcgcaacaggaagcagtgat
gcatcaatcaaaattttggatgttgaaagaatgctggctaaagcacatgatattggtagt
actgataatcaagaaggacaggggcatccagtaattcggactttgtatgatcatttggaa
gaagtgacgtgcttagagttccaccctaacaagccaattttagcttcgggctctcgagat
tgtcatgttaaactttttgattattcaaaaacatctgtgaagaaagccttcaagacaatt
aacgatgtcgaacctataacatgtataagttttcatccccttggagactttatagtaatg
ggcaccaatagcccagtcataaggctttatgatataaatacagttcaatgttatgtttgt
tcacttcctagtcatcaacatactggtcctgttacatcaataaagtatgaaccaagtgcc
agatactttgtgtcttctagtcgagatggttcaattaaattatgggacgctgtgtctaat
aaatgtgttaacacatttgaaaaagcacatgatggtagtcaagtgtgttctgtgacattt
tcaagaaatggaaagtacatcttatcatcaggcaaagattctttagtgaaactttgggaa
ttatccactagtagatgtctgattgcatatactggagctggaacaactggaaaacaagaa
catcgtacacaagcattgtttaatcatactgaggagtatgtcatgtttccagatgaagcc
actacatctttgtgcgcatggaatgcacgcaatgcttctcggcagcaacttttatctcta
ggtcataatggacctattcgttcaattgtgcattctccaaattcagcagcatttttgact
tgttcagacgactttagagcccgtttctggtatagaaaacacttgattggagcatag
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