Acyrthosiphon pisum (pea aphid): 100575301
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Entry
100575301 CDS
T01076
Name
(RefSeq) nuclear RNA export factor 1 isoform X1
KO
K14284
nuclear RNA export factor
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03008
Ribosome biogenesis in eukaryotes
api03013
Nucleocytoplasmic transport
api03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100575301
03015 mRNA surveillance pathway
100575301
03008 Ribosome biogenesis in eukaryotes
100575301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100575301
03009 Ribosome biogenesis [BR:
api03009
]
100575301
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100575301
mRNA cycle factors
Stress granule specific factors
100575301
Ribosome biogenesis [BR:
api03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
100575301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
LRR_NXF1-5
TAP_C
NTF2
LRR_4
UBA_8
Motif
Other DBs
NCBI-GeneID:
100575301
NCBI-ProteinID:
XP_003241196
UniProt:
A0A8R2A6D7
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All DBs
Position
A3:20015402..20023198
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AA seq
545 aa
AA seq
DB search
MMEAMVTRYNPSTKILDLSQFYTCSLFTNNQLFVPLNRPAVLLAALNMAAQYTKHDLCCL
NLSKNYIYLGEGLTWIRRLFPELKVLDLADNKLSDLNELRSLSGYSVEVLNLFRNPVCNS
MDKECYRRDVQKLFPMLIKLDNLNLPSLDIVGTKLKMPINLGNSYPILQYGCNLIQSNPL
ITLVELFLTKYYKQYDDTMSRQMVLEAYHENATFSLSSCLLKTCNQGSLADYLPKSRNLL
TIGLNKNINSFIHKGKANILSILEKLPKTKHDFGSFIIDVPFASSTIIQVVVNGVFAEEY
NENHNHQVFRSFCRTFSLVPAVNGWVILSDMMLVTLVSSELSAESTKRFYIFKPTMMNNT
YNRTSLQTTIQDTLPDVLSTLDFKTSIPKCPSSTSFLSKELPPLSLPTNPQQTSACQTNF
QTSVIQNLQSSHQQQNPPASATVGILLNSQELNSSCPMSNSKLSFPVNNTKPIESDFTTS
TKMHSSSNIDNTNNELLMIKRFSNETGMNNKWSKKCLVDNNWDFAKATLCYSKLKPNIPS
IAYKH
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggccatggtgactcgttacaatcccagtaccaagatcttagatttgtcgcaa
ttttatacttgttcactgtttactaataatcaactatttgtaccattaaatcgtccagcc
gttcttttggcagcacttaatatggcggctcaatataccaagcatgacttgtgttgtttg
aatctttccaaaaattacatatatttaggtgaagggcttacatggatacgtagattgttc
cctgaattaaaagtgttggatttagctgataacaaattgtctgatttaaacgaactaagg
agtctctcgggttattcagttgaagtgctcaatttgttcagaaatccagtatgcaattca
atggataaagagtgttacagacgggatgttcaaaaactatttcctatgttaatcaagttg
gataacttaaatttgccttctttggacattgttggtactaagttgaaaatgccaatcaac
ctgggaaatagttacccaatacttcagtacggctgcaacttaatacaatcaaatccatta
attactctagtagaattattcctaacaaaatactataaacagtatgatgatacaatgtcc
agacaaatggtattagaagcctaccatgaaaatgcgacgttttcattatctagttgttta
ctaaaaacctgtaaccagggtagtctagcggattacctgccaaaaagtcgaaatttgttg
acaatcggccttaacaaaaatataaatagttttatacacaaaggtaaagcaaatatatta
agcattttagaaaagttacccaaaacaaaacacgactttggctcattcattattgatgta
ccatttgcaagttctacaataatacaggttgtagtgaatggtgtgtttgccgaagaatat
aatgaaaaccacaatcatcaagtatttcgatcattttgtaggacattcagtttagtgccg
gctgtaaatggttgggttatattaagtgacatgatgcttgtaacattagtctcctccgag
ttatcggcagaatcaacaaaacggttctatatttttaagccaacgatgatgaataataca
tataatagaaccagtttacaaacaacaatacaggatacattgcctgatgtattgtcaact
ttagacttcaagacatccatacccaaatgtccatcatcgacatcttttttatctaaagaa
ctccctccattgtcactgcctacgaatccacagcaaacctcagcttgtcaaacaaatttt
cagacatctgtcatacagaacttacagtcatctcaccagcaacagaatccccctgcatca
gcaacagttggtatcctattaaactctcaagagttaaattcatcatgtcccatgtccaat
tctaaattatcatttcctgtaaacaacacaaaaccaatagagtcagacttcacaacatct
accaaaatgcattcttccagtaatattgacaatactaataacgaattgttaatgatcaag
aggttttcaaatgagacaggaatgaacaataaatggtcaaaaaagtgcttagtcgataat
aattgggattttgccaaagctacattgtgttattcaaaactaaaacctaatattccttca
atagcatataaacactga
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