Acyrthosiphon pisum (pea aphid): 100575904
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Entry
100575904 CDS
T01076
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
api
Acyrthosiphon pisum (pea aphid)
Brite
KEGG Orthology (KO) [BR:
api00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100575904
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
100575904
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
CCDC93_CC
WxLIP_PGBD
Motif
Other DBs
NCBI-GeneID:
100575904
NCBI-ProteinID:
XP_008180268
UniProt:
A0A8R1X1M1
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Position
A2:64572238..64576124
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AA seq
585 aa
AA seq
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MQTNECFVCGCNDFTVTDGAFVCNECGIQSQSVREEHINFHEDVNQNYEDPTHIDHEITT
GSQLEKPKKLLSWECYNFILLGLTNEMIELGAKPSLKIIVLQLWVQYLQCIEVAFTSKKF
RKLPKLNTAIIDMDCEILYGVENVKNKILHAKIGIAHGNKKKRCSNKRKSLTSSINSSMT
SLNKRNMFSRKIKKLDHSTRDSNNDSVGLTDDISLLQRSNKSSKIKIKFKKNIKKSLTTM
PSKTKDLTTEESLKLLESGSKYWNSLKYKEKKNVLSIKKLLSILQLALMINGDDIYLSDI
LRWFHEGHLHINRVNLFLPVNSKHGIKFNQMVPSSRNTLNIEFHMLLKHLKAEQLPNIDF
KKIVMRFSDELQLPNDFTHFVCKLVSISPPSTKCNRILPDIEVKVMAYILFAAKFLFCLD
GNSENLSSDFAEKINQSDIVDKKLFSWNGYVQYIEFRNCIVSKYNYYLHENLYGNNIRNT
QLFINDWNMMRPTLPVIERDKICKSFRDNTECLLKSLPDFGRKKSYREIPASTKPLSSTL
KWIVEYHSTELSNEAKTILENNFIQTDILYLTDEKRYLCNNYGVI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactaatgaatgttttgtttgtggttgtaacgattttactgttactgatggagca
tttgtatgtaatgaatgtggaatacagtctcaaagtgttagagaagaacacataaacttt
catgaagatgttaatcagaactatgaagatccaacacatatagatcatgaaataacgact
ggatctcaactagaaaaacctaagaaacttttatcttgggaatgttataattttatactt
ttaggacttaccaatgagatgattgaacttggagctaaacctagcttaaaaattatagtg
ttacaattatgggttcaatatttacaatgcattgaagttgcgtttacatcaaagaaattt
aggaaacttccaaaattaaacacagcaataattgatatggactgtgaaattttatatggt
gttgaaaatgttaaaaacaaaattctacatgcaaaaattggtattgcgcatggaaataaa
aaaaagagatgttccaataaaagaaaatcattgacctctagtattaattctagtatgaca
agccttaataaacgaaatatgtttagccgaaaaataaaaaaattagaccactctacaaga
gattcaaataatgactcagtaggattaacagatgatataagtttattgcaaagaagtaat
aagtcaagtaaaatcaagattaaatttaaaaaaaatataaaaaaatctcttactacgatg
ccatcaaagactaaagatcttactacagaagaatcattaaaacttttggaatctggcagc
aaatattggaatagtttaaaatataaagaaaaaaagaatgttttatctattaaaaaacta
ctatctatattacaattagctcttatgatcaacggagatgatatttacctatctgatata
ctcagatggtttcatgaaggacatttgcatataaatcgtgttaacttatttttaccagta
aattcaaagcacggtattaaatttaatcaaatggtgcctagttccagaaatacattaaat
atagaattccacatgttattgaaacatttaaaagctgaacaactacccaatattgatttt
aaaaaaatagtgatgcgtttttctgatgaactacaacttccaaatgattttacacatttt
gtttgcaaacttgtgtcaatatctcctccaagcactaaatgtaaccgaatattaccagac
atagaagttaaagtaatggcttacatactatttgctgccaaatttttattttgtcttgat
ggtaactcagaaaacttatcatcagactttgctgaaaaaattaaccaatcagatatagtt
gacaaaaaattgtttagctggaatggttatgtgcaatacatagaatttagaaattgtatc
gtatctaaatataactattatctgcatgaaaatttgtatggaaacaatatacgcaacact
caattatttatcaacgattggaatatgatgaggccaactttacctgtaatagaaagagac
aaaatatgtaaaagttttagggacaatactgaatgtttgcttaaatcattacctgatttt
ggaagaaaaaaaagttatagagaaattcctgcttcaactaaaccattgtcatcaacttta
aaatggatagttgaatatcattcaacagaattaagtaatgaagcaaaaacaatactagaa
aataattttattcaaactgatatcttatatctaactgatgaaaaaaggtatttatgtaat
aattatggtgttatataa
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