Acyrthosiphon pisum (pea aphid): 103310597
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Entry
103310597 CDS
T01076
Name
(RefSeq) LOW QUALITY PROTEIN: general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03022
Basal transcription factors
api03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103310597
09124 Replication and repair
03420 Nucleotide excision repair
103310597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
103310597
03400 DNA repair and recombination proteins [BR:
api03400
]
103310597
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103310597
DNA repair and recombination proteins [BR:
api03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103310597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
103310597
NCBI-ProteinID:
XP_029343593
LinkDB
All DBs
Position
A1:complement(89888887..89889864)
Genome browser
AA seq
305 aa
AA seq
DB search
MQSETPKKIFSSLLVIILDVNPAQDTLLSGEIKLSSILSSVVAFANSHLMLRTHNKVAVL
ASDPNSCDFIYSDQDELDFKKKTVSSCKMGGSQYELFSHIDRSIKFNIVKFLKDAAEEPH
MSRDTVFGASCAKALCYINRLQSNLFPGETMNSRILIISGCDNEGDKYIRCMNTFFTAQK
QNVAIDVCSLTHDVTLLKQACYITEGSYFRMPKLEGLLLYLQWIFLTEPSSRKKLVIPLA
PQLDFRPFCXCHGTLTAIGFVCSLCLTIYCKISPICTTCEAVFKVRSAIAVKPKKKKIKT
TSVNN
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcagaaacgccaaagaaaatattttccagtcttctggtaataatccttgatgtt
aacccagctcaagatactttacttagtggagaaataaagctatcatccatacttagttct
gttgtagcttttgctaattctcacttaatgcttcgaacccataataaagttgctgtactt
gcgtctgacccaaatagttgtgattttatatattccgatcaagatgaacttgattttaaa
aagaaaacagtcagtagttgtaaaatgggtggaagccaatatgaattgttcagtcacata
gatcgttctatcaaatttaacattgtgaaatttctcaaagatgcggcagaagaaccacat
atgtctagagatactgtctttggagcatcttgtgctaaggctttatgctatataaacaga
ttacaaagtaatctatttccaggcgaaacaatgaattcaagaatattaattatatctggt
tgtgataatgaaggagacaaatacatacgttgtatgaatacatttttcacagctcaaaaa
caaaatgtagccattgatgtatgtagtcttacacatgatgtcactcttttaaaacaagca
tgttacatcactgaaggttcatattttcgtatgcctaaattagagggattattactgtat
ttacagtggatatttttgacggaaccttcttctaggaaaaaattagttataccattagct
ccacagttagacttccgacctttttgtntttgtcatggaaccctaacagcaattggtttt
gtgtgttcattatgtttaactatttattgtaaaataagtcctatttgcacaacttgtgaa
gcagttttcaaagtacgatcagccattgcagttaaacctaaaaagaagaaaattaaaaca
acaagtgtaaataattaa
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