Apibacter sp. B2966: G8C43_00190
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Entry
G8C43_00190 CDS
T06471
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
apib
Apibacter sp. B2966
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apib03016
]
G8C43_00190
Enzymes [BR:
apib01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
G8C43_00190
Transfer RNA biogenesis [BR:
apib03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
G8C43_00190
Prokaryotic type
G8C43_00190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
PDEase_II
Lactamase_B_6
DUF5855
Ribosomal_S18
Motif
Other DBs
NCBI-ProteinID:
QII71254
LinkDB
All DBs
Position
50426..51352
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AA seq
308 aa
AA seq
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MKLTILGYNSAVPTVRTNPTSQLLECNNQYFLIDCGEGTQVQLRKARVKFTHINTIFISH
LHGDHVFGLIGLISSFHLLGRTEPLTIYGPKGIKKLIKVQLLLTESSNQFDINFIELTSL
KSELIYENNKLCVWTIPLNHRIYTNGFLFKEKVKPRRLNMDVIKYNPEIEVCDYHNLKLG
KDFITQSGDIIKNEYLTLPPKHSYSYAFCSDTKFSPNIVPLIKGVDVLYHEATFLDELRE
LASKTGHTTAHQAAEIAKMANVKVLILGHFSNRYTDISILKEEAVQVFFNTILPEELLTL
DFNKLIIN
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttactattttaggatataactcagcggttcccactgttcgtaccaatcctaca
tctcagttattagaatgtaataaccaatattttctaatagattgtggagaagggactcaa
gtacaacttagaaaagcaagagtaaaatttacccatataaatactatatttatttctcat
ctgcatggcgatcatgtttttggtttgatcggacttatatcttcctttcatttattggga
agaaccgaacctttaaccatttatgggcccaaaggaattaaaaaattaattaaagttcaa
ttactattaactgagagtagtaatcagtttgatattaactttattgaactgacttcttta
aaaagtgaattaatttatgaaaataataaattgtgtgtttggacgattccattaaaccat
cgtatttacaccaatggatttctgtttaaagaaaaagtaaagccgagaaggcttaatatg
gatgtaattaaatacaatcccgaaattgaagtatgcgattatcataatttgaaattaggt
aaagattttataactcaatccggagatatcataaaaaatgagtatcttacccttcctcct
aaacattcttacagctatgccttttgttcagatactaaattcagtcccaatatagtcccg
ttaattaaaggggtagatgttttataccatgaagctacttttttagatgaattaagagaa
ttagcttctaaaacaggacataccacagcacatcaagccgcagaaatagcaaaaatggca
aacgttaaagtattaatattagggcatttttccaatcgttataccgatatatccatacta
aaagaagaagccgttcaagtctttttcaatacgattttacccgaagagcttttaacttta
gattttaataaactgataattaattaa
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