Apibacter sp. B2966: G8C43_03540
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Entry
G8C43_03540 CDS
T06471
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apib
Apibacter sp. B2966
Pathway
apib03420
Nucleotide excision repair
apib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G8C43_03540
03430 Mismatch repair
G8C43_03540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apib03400
]
G8C43_03540
Enzymes [BR:
apib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G8C43_03540
DNA repair and recombination proteins [BR:
apib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G8C43_03540
MMR (mismatch excision repair)
Other MMR factors
G8C43_03540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
DEAD
AAA_11
DUF1840
Pkinase_fungal
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QII71887
LinkDB
All DBs
Position
complement(825329..827650)
Genome browser
AA seq
773 aa
AA seq
DB search
MKDLFADLNEVQKQAVSTTEGPLMIIAGAGSGKTRVLTYRIAHLIDKGVDSFNILALTFT
NKAAREMKERIAALIGGTEAKNLWMGTFHSVFARILRAEANKLGFPSNFTIYDQQDCLNV
IKKIINELQLDTDIYKPKQVLGRISSYKNNLITVRAYFNNPELIEADTAAMRPKIGHIYQ
AYVDRCFKSGAMDFDDLLLRTNELLTRFPESLAKYQDRFRYIMVDEYQDTNHSQYLIVKA
LASRFENICVVGDDAQSIYAFRGANIRNILNFKKDYPDAKIIPLEQNYRSTQIIVEAANE
VIAKNRDQLEKNVWTQNPSGDKIPVYRALSDADEANYVASEIFSLKMSQQKKNKNFAVLY
RTNAQSRAIEEALRKKNISYKVFGGLSFYQRKEIKDLLAYLRILVNPKDQEALLRIINYP
ARGIGDTTVNKLIVGADQQQKSLDEILEQIEFLGNSLGLNKPTIDKLVNFWTMIKSFQVL
LKTEDVYEVAMKVAVTSGILKTLKEDDTPEGISRVENIQELLNSLQGFVDEQRQLDEGDP
SLNFFLENIALASDLDSGEEDDDKVSLMTIHLAKGLEFPVVFIVGLEENLFPSQMSLNTR
QELEEERRLFYVALTRAEEKAYFTYATTRFRWGKIVDGEPSRFLEEISEKHLEVLNISFT
NSIRNNSGLNSDIFADDFAPRYPKGPSPVYQKSKDPIKSPQNLKPISNAKLANPVGGSVA
NLKIGDHVLHDRFGKGTVVSIEGDPENAKALINFENEGDKKLLLKFAKLKVLE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatttatttgcagatttaaacgaagttcaaaaacaggcagttagtacaacagaa
ggccccttaatgataatagcaggtgcaggttcaggtaagaccagggttttaacttacaga
attgcccatttaatagataaaggagtagattcctttaatattcttgcgcttacatttacg
aataaagcagcacgagaaatgaaagaaagaatagctgcattaattggaggaactgaagct
aaaaatttatggatgggaacatttcattccgtttttgcgagaattttacgtgcagaagca
aataaattagggtttccttctaattttactatttatgatcaacaggattgtcttaatgtt
ataaaaaaaataataaatgaactacagcttgatactgatatatataaacccaaacaggtt
ttaggacgcatatcaagttacaaaaataatttaatcacggttcgtgcatattttaataac
ccggaattaattgaagcagatactgccgctatgcgaccaaaaattggtcacatatatcaa
gcctatgtagatcgttgtttcaaatcgggagcgatggattttgatgaccttttgcttcga
accaatgaattgcttacccgttttccggaatccttagccaaataccaagaccgttttcgc
tatattatggtggatgagtatcaagatacgaatcattcacaatatttaattgtaaaagca
ctcgcatccagatttgaaaatatatgtgtggttggagatgatgcgcaatctatatatgca
tttaggggagcaaatattagaaatatcctaaatttcaaaaaagattatccggatgccaaa
ataattcctctggaacaaaattatcgatccacacaaattattgtggaagcagcgaatgag
gtgattgccaaaaatagggatcaacttgaaaaaaatgtatggacgcaaaatccttctgga
gataaaattccagtttatagagctctctcggatgcagatgaagcaaattatgtagcatca
gagatattttcattaaaaatgtctcaacagaaaaaaaataaaaattttgccgtactttat
cgcaccaatgcccaatcaagagctatagaagaagccttacgaaagaaaaatatatcgtat
aaagtatttggaggactttctttttatcaaagaaaagaaattaaggatctcttagcctat
ttaagaatattagtgaatccaaaagatcaggaggccctattaagaattataaattatcct
gccagaggtataggagatacaactgtcaataagctaattgtaggagcagatcaacagcaa
aagtctttggatgaaattctggaacagattgagtttttaggaaattctttaggattaaac
aagccaaccattgataaattagtcaacttttggactatgattaaaagttttcaggtttta
ctgaagacggaagacgtatatgaagttgccatgaaagttgccgttacctcaggaattcta
aaaacattaaaagaagacgacacacctgaaggaatttcaagagtagaaaatatacaagaa
ttattaaacagtttacaaggatttgtagatgaacaaagacagctggatgaaggagatcct
agtttaaattttttcctggaaaatatagctttagcttcagatttagattcaggtgaagaa
gatgatgataaagtttcattaatgacgatccatttagccaaagggttggaatttccggtg
gtttttatagttggtttagaagaaaatttatttccttctcaaatgtcattaaacacccgt
caggaattagaagaagaaagaagattattttatgtagcattaaccagagctgaagaaaaa
gcctatttcacgtacgctaccacacgtttcagatggggtaaaatagtggatggagagccg
agtagatttttggaagaaatcagtgaaaagcatttggaagttttaaatatcagttttacg
aattcgataagaaataattcgggattgaactcggatatctttgccgatgatttcgcacct
agatatcctaaaggacccagtcctgtttatcagaagtcgaaagatccgattaaatcacca
caaaacttaaagcccatatctaatgcaaaattagcaaatccggtaggaggttcggttgcc
aatttaaagataggagatcatgtcttgcatgaccgtttcggaaaaggtactgtagtatca
attgaaggggatcccgaaaatgctaaagcacttataaattttgaaaatgagggagataaa
aaattattgttaaaatttgctaaactcaaggttttagaataa
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