Apibacter sp. B2966: G8C43_03875
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Entry
G8C43_03875 CDS
T06471
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
apib
Apibacter sp. B2966
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apib03032
]
G8C43_03875 (topA)
03400 DNA repair and recombination proteins [BR:
apib03400
]
G8C43_03875 (topA)
Enzymes [BR:
apib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G8C43_03875 (topA)
DNA replication proteins [BR:
apib03032
]
Prokaryotic type
DNA Topoisomerases
G8C43_03875 (topA)
DNA repair and recombination proteins [BR:
apib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G8C43_03875 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Motif
Other DBs
NCBI-ProteinID:
QII71951
LinkDB
All DBs
Position
complement(919978..922302)
Genome browser
AA seq
774 aa
AA seq
DB search
MNLVIVESPAKAKTIKKFLGNDFEVESSYGHITDLAKKDMGIDMKTLEPIYQVSSDKKEV
VKKLKSLAKKADTVWLASDEDREGEAIAWHLFNELQLKSENTKRIVFHEITKNAIQKAIQ
NPRNIDINLVNAQQARRVLDRLVGFEMSPILWSKIKAGLSAGRVQSVAVRLICEREKEIE
KFIPVPTYKVEADFYNKSHNLLKSKLNTDFQDYSKALDFIQRAQGKRFTISNVETRPSKR
SPSAPFTTSTLQQEAAKLGFSVSRTMMLAQQLYESGYITYMRTDSVNLSEEALNSAKDVI
IGQYGKEYLNTRQYTTKNKSAQEAHEAIRPTNLSVQEAGADDSQKKLYHLIWRRTLASQM
ADAKLERTIVDISNPELKEKFVTKGEVIVFDGFLKVYQIQKEEDSADEDNNEGLLPVVEK
GEEVQLSQIIGEEKFSRPAARYNEASLVRKLEELGIGRPSTYAPTISTIQKRQYVEIRDL
DPKQREVKKILLKDDTIKEGVEIENYGADRRKLMPTDIGLVVNEFLTEHFPTILDYGFTA
KVEEDFDNIAGGNENWKEMLTGFYDDFHPHVEEVKETAERATGERLLGQDPISGKNIYAR
IGRFGPMIQMGETEDEEKPKFAGLMKGQHINSITLEEALKLFELPKYLGDYEDKKVEVNT
GRFGPYVKHNSKFFSLKPKEGDEISTITLERAIELIEAKREADRNKFIKAFESEDPIIEI
LNGRWGPYIKQGKENYKIPKDTEADKLTLEDVKKLISESGSKTKPKSKTKSKKK
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggtaattgttgaatcgcccgcaaaggccaaaacaataaaaaaatttttagga
aatgactttgaagttgaatctagttatggtcatataactgatttggcaaaaaaagacatg
ggtatagatatgaaaactctagagcccatatatcaagtctcctcagataaaaaagaagtc
gttaaaaaactaaaatcattagcaaaaaaagcagatactgtatggttggcttccgatgaa
gatcgtgaaggggaagctattgcttggcatttatttaatgaattacaacttaaatcagaa
aatactaaaagaattgtttttcatgaaataaccaaaaatgccatacaaaaagccattcaa
aaccccagaaatatagatattaatctggttaatgcacaacaggcccgaagagtgttggac
cgattggtaggatttgaaatgtcacctattctttggtctaaaataaaagccggattatct
gcaggaagagtacaatctgtggctgtacgtttgatctgtgaaagagaaaaggaaattgaa
aaatttattccggttcctacgtataaagttgaagcagatttttacaataaatctcataat
ttattaaaaagtaaattaaatactgattttcaagactattctaaggcattagattttata
caaagagcccaagggaaaagattcacaatatccaatgttgagactcgtcctagtaaaaga
agtccatcagcccctttcactacatctactttacaacaagaagctgccaaattaggattt
tcagttagtagaacaatgatgttagctcaacaactctacgaatcggggtacattacctac
atgagaaccgatagcgtcaatttatcagaagaagcgttgaattctgcaaaagatgtaatt
attggacaatatggaaaagaatatttaaacacacgacaatataccacaaaaaataagtct
gctcaagaagctcacgaagcaattcgtccaaccaatttatccgtacaagaagcaggggca
gatgattcacaaaagaaactatatcatttaatttggagaagaactttggcctcacaaatg
gccgatgctaaattagaaagaacaattgtcgatatatcaaatccggaattaaaagagaag
ttcgtaacaaaaggagaagttattgtctttgatggatttttaaaagtataccaaattcaa
aaagaagaagattcagccgatgaagacaataatgaaggactcttacctgtcgtagaaaaa
ggagaagaagtacaactatctcaaattattggcgaagaaaaattcagtaggccggcagct
agatataatgaagcctctttagtaaggaaattagaagaattaggaatcgggcgtccttcc
acatatgctcctactatttctacaattcaaaaaagacaatatgtggaaatcagagattta
gatcccaaacaaagggaggttaagaaaattcttttaaaagatgatactataaaagaaggt
gttgaaattgaaaattatggagcggatcgaagaaaattaatgccgacagatataggatta
gttgtaaatgaatttttaacggaacattttccaaccatattagattatggcttcacagca
aaggttgaagaagactttgacaatatagccggaggaaatgaaaactggaaagaaatgttg
accggtttttatgatgattttcacccccatgtagaagaagtaaaagaaacggcagaaaga
gctacaggagaaagattattaggtcaagatcctataagcggtaaaaatatttatgctcgc
ataggcagattcggtccaatgattcaaatgggtgaaaccgaagatgaagaaaagccaaaa
ttcgccggtttaatgaaagggcaacacataaattcaataactttagaagaagcgcttaaa
ttatttgaattgcctaagtatttaggagattatgaagataaaaaagttgaagtaaataca
ggaagatttggtccttatgtaaaacataacagcaagtttttttctttgaaacctaaagaa
ggagatgaaatttcaactattactttagaaagagctatcgaattaatagaagcgaaaagg
gaagcagacagaaataaatttattaaagcatttgaatcagaagatccaattattgaaatt
ttaaatggaagatgggggccttatattaaacaaggaaaagaaaattataaaatccctaaa
gacacggaagccgataaattaactctcgaagatgtcaaaaaattaatctcggaatcaggt
agtaaaaccaagcctaaatccaaaaccaaatcaaaaaagaaataa
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