KEGG   Apibacter sp. B2966: G8C43_04725
Entry
G8C43_04725       CDS       T06471                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
apib  Apibacter sp. B2966
Pathway
apib03030  DNA replication
apib03430  Mismatch repair
apib03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:apib00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G8C43_04725
   03430 Mismatch repair
    G8C43_04725
   03440 Homologous recombination
    G8C43_04725
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:apib03032]
    G8C43_04725
   03400 DNA repair and recombination proteins [BR:apib03400]
    G8C43_04725
Enzymes [BR:apib01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G8C43_04725
DNA replication proteins [BR:apib03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G8C43_04725
DNA repair and recombination proteins [BR:apib03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G8C43_04725
SSDB
Motif
Pfam: RNase_T DEDDh_C RNase_H_2 Rv2179c-like DNApol_Exo RRM_1 DNA_pol_A_exo1 Snapin_Pallidin
Other DBs
NCBI-ProteinID: QII72107
LinkDB
Position
1092928..1094193
AA seq 421 aa
MDYAILDVETSGGKFNEESLIEIAIYRFDGEKITDSFSSLVNPEKEIHFYVQKLTGITQK
MVKTSPKFYELAKRIVEITDDAILVGHNISFDYRVIRSEFSRLGYDYQRPTLDTITLSRN
LIPGMTSYSLGKLCDSLGIPVSDRHRAHGDARATVKLFQLLLAKDLHKNIIGSSIKHSNY
QSLNKKILSFLEKLPLETGVFYFHDENDKIIYIDKGLDISTKARQILTSKSKRSRILQVK
TKEISFELTGNEIIANIKALNEIKINRPLYKPTKENYTTIFGIFFTPPTLSIDFINSKNK
KYALFAFETLDKAEDALLSLQKKIDNGVNILSEINFQEDTYILLTDKGRTFGEKSFLFFE
NGHFKGYGFYSLHTQIKNVEQIKKIMVPSTINVEILLQIRNKFFISNKLQKIIISEPNLF
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atggactatgcaattttagatgtggaaaccagcggtggtaaatttaatgaagaaagttta
attgaaatcgccatatatagattcgatggagaaaaaattacagattcttttagctcttta
gtcaaccctgaaaaggaaatacatttttatgttcaaaagctcacgggcattacgcaaaaa
atggtaaaaacttcacccaaattttatgaattggcaaagcgaattgttgaaatcacggat
gatgccattcttgttggacataatattagtttcgattatcgtgtaatacgcagtgaattt
tctcgtttaggatatgactatcaacgacccaccctggatactatcacattaagccgaaat
ctaattccgggtatgacctcctattctttaggtaaactttgtgattcgttgggaattcct
gtaagtgatagacatagagctcatggagatgctcgcgctaccgttaaattgtttcagctt
ttattagctaaagatttacataaaaatattattggatcatccataaaacatagcaactac
caatctttaaataaaaaaatactttcttttttagaaaagcttccccttgaaaccggagtt
ttttattttcatgatgaaaatgacaaaattatatacatcgataaaggtttagatatttct
actaaagccagacagattttaacttcaaaaagtaaaaggtcaagaattttacaagttaaa
accaaagaaatcagttttgagcttaccggaaatgaaattattgcgaacataaaggcttta
aatgaaattaaaattaatcgccccctttataagcctactaaagaaaattatactactata
ttcggtattttctttacgccacccactttaagcattgattttatcaattctaaaaataaa
aaatatgctttattcgcttttgaaaccttagataaagctgaagatgcattactttcttta
caaaaaaaaatagacaatggtgtaaatatactttcagaaataaattttcaagaagatacg
tatattttattaacagataagggaagaacattcggtgaaaaatcttttttgttttttgaa
aacggtcattttaaaggatacggtttttattccctgcacacacaaataaaaaatgtagaa
cagataaaaaaaataatggttccatccaccataaatgttgaaattttacttcaaatacgt
aataaatttttcatttcaaataagttacaaaaaattattatttcagaacccaaccttttc
agttaa

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