Apibacter sp. B2966: G8C43_05000
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Entry
G8C43_05000 CDS
T06471
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
apib
Apibacter sp. B2966
Pathway
apib03030
DNA replication
apib03430
Mismatch repair
apib03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G8C43_05000 (holA)
03430 Mismatch repair
G8C43_05000 (holA)
03440 Homologous recombination
G8C43_05000 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apib03032
]
G8C43_05000 (holA)
03400 DNA repair and recombination proteins [BR:
apib03400
]
G8C43_05000 (holA)
Enzymes [BR:
apib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
G8C43_05000 (holA)
DNA replication proteins [BR:
apib03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
G8C43_05000 (holA)
DNA repair and recombination proteins [BR:
apib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
G8C43_05000 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QII72158
LinkDB
All DBs
Position
1160017..1161027
Genome browser
AA seq
336 aa
AA seq
DB search
MKEYNNLVKDIKNKKFLPVYFLQGDEPFYIDKLTELLEENVLKEEEKAFNQNIIYGTESD
LDQIISLAKQFPMGADKQLIIIKEAKGLPFDKSEAFDNYIKNPQPSTILVINYKYKSLDK
RKSVTKLLSKQGYIFTSEKLYDNQVPTWIGSLCQSNGLEIDEKSRILLAEFLGTELSRID
NEIQKLKLIVGNSKKITPEIIERNIGISKEYNNFELRKAIVEKNTKQAYKIIDYFEKNPK
ANPIVLTFGTLISLFSNILIVHTLPIKTPQNIAKELRINPFFANEYLTAIKNYSLKKTTA
CIAYLRDADMKSKGVDVSSHATSKDILMEMLYKILH
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatataataatttagtcaaagatattaaaaataaaaagtttcttcctgtatat
tttttacagggtgatgagcctttttacatcgataaacttaccgaattactggaagaaaat
gtcctaaaggaagaagaaaaggcttttaaccaaaatattatttacggtacagaatctgat
ttggatcaaattatatctttggcaaagcaatttccaatgggagccgataaacagcttata
ataattaaagaagcaaagggattgccttttgacaaatccgaagcctttgataattatata
aaaaatcctcagccttcaactatattagtcatcaattataaatacaaatctttagataaa
agaaagtcggtgactaaattactcagtaaacaaggatatatttttacaagcgaaaagcta
tatgacaaccaagtacccacttggatcggttcattatgtcaatcaaacggtttggaaatt
gacgaaaaatccaggattttacttgccgaatttttaggcactgaactttcccgtattgat
aatgaaattcaaaaacttaaattaattgtaggtaattccaaaaagataactcctgaaatc
attgaacgaaatattggaatcagcaaagagtacaacaatttcgaattaagaaaggccatc
gttgagaaaaatacgaaacaggcttataaaataatagactattttgaaaaaaacccaaaa
gcaaatcctattgttttgacttttggaacattaataagtttattttccaatattcttatc
gtacacactttaccgataaaaactcctcaaaatatagctaaagaacttcgtattaatcct
ttctttgctaatgagtatttaaccgccattaaaaattattctttaaaaaaaactactgca
tgtattgcttatttgcgagatgcagacatgaaatccaagggagtggatgtttcatctcat
gcaacttctaaagatatcttaatggaaatgttatataaaatacttcattaa
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