Apibacter sp. B2966: G8C43_07225
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Entry
G8C43_07225 CDS
T06471
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
apib
Apibacter sp. B2966
Pathway
apib03420
Nucleotide excision repair
apib03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
G8C43_07225
03430 Mismatch repair
G8C43_07225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apib03400
]
G8C43_07225
Enzymes [BR:
apib01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
G8C43_07225
DNA repair and recombination proteins [BR:
apib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
G8C43_07225
MMR (mismatch excision repair)
Other MMR factors
G8C43_07225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
AAA_11
Cas_Cas4
AAA_12
DUF2800
Sigma70_r1_1
DUF2605
AAA_14
ResIII
Motif
Other DBs
NCBI-ProteinID:
QII72567
LinkDB
All DBs
Position
1663650..1666568
Genome browser
AA seq
972 aa
AA seq
DB search
MVLEEIWKIDKQALNKNQKEAILNTEGPLLIIAGPGAGKTKTLVERVVYLISKGVNAETI
LVATFTEKAAKELVTRISNRLLQLGIDINLNEMYIGTLHSIFLRILEEYREFTSLKRNYN
ILDQFDQRYLIFRNINRFTAVENSDFIWKINLSNWIKADIVVKYVSKIAEEYIDPDELYN
SDEPDLQVIGDFYKEYQKLLKEENVIDFATIQSKALGLLEYNPDILAELQNKIKYIMIDE
YQDTNTIQERLILLLADKHKNICVVGDDDQSLYRFRGASIRNILEFSTHFEKGTCKKVTL
DTNYRSHPDIINFYNRFMNRHNWNHNGKTFRYEKTIKPNDGEYPNIPAVIKVSKHNDKEA
YHQEVYNFIKDLKDKGVLTDYNQIAFLFKSVQSDQAIGLAEFLEDKGIPVFSPRSKMFFE
REEIRLLIGAFVTIFPNLFQRLKWNDTAELDIWYYYRGCQVEFMNEFTKDSQTHKTLYKW
TLSKMKAHTNFSQSTNYAFAALLYQLLEFPMFSKYLDVNLQEKKTDLRATYNIAMFSKLL
FKFEHTYNITVFTEKNIDRTLKELFNKFLRFLKEGGLEEYEDFEEYAPSGCISFMTIHQS
KGLEFPIVIVGSLNASPREQYDDIDLKLQSDYYHKPPFEPIKKTKYYDFYRLFYTAFSRP
QNLLVLSACTREGQGRTPSKHFADTFNKLPSWTDERFKPELLELENLKPINIKHEYAFTS
DILLYENCPLQYKFYKELGFVEVRTGGVLGGSLLHQTIEDIHRAVLKKEENKLTNYNITD
WFNRNYQLLSKQQRSYLHQGQLNALLKQVLRYRDRNQSRWNLILETEVDVSLVKEDYILK
GTIDLIKGDNETVELVDFKSGDKPDVNSTDPKVRKLLNQYQRQLEVYAHIIEKNKGVKIS
KLHLYYPKEDDGIPYITFKANIDNINATIDIFSEVVNRIESKDYDMSRTPKGEKQCGECD
MRYYCNPHTFSE
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggtgttagaagaaatatggaaaatcgataaacaagctcttaataaaaaccaaaaggaa
gctattttaaatacagaaggccccctgctaataattgcgggtccaggagcaggtaaaaca
aaaacccttgtggaacgtgtagtttaccttatatcaaaaggtgttaatgcagagactata
cttgttgctacattcactgagaaagcagcaaaagaacttgtcacaagaatttcaaatcga
ttattacaacttgggatagatattaatctcaatgaaatgtatattggtacactacattct
atttttcttagaatattggaagaatatagagagtttacgagtcttaaacgaaactataat
attcttgatcaatttgaccaacgatatcttatatttagaaatatcaatagattcacagca
gttgaaaatagtgacttcatttggaagataaatttatccaattggattaaagctgatatc
gttgtaaaatatgtatctaaaatagcagaagaatatatcgaccctgatgagctatacaat
tctgatgagcctgatttacaagtgattggtgatttctacaaagaatatcaaaaactgctg
aaagaagaaaatgttattgattttgctactatacagagtaaagctcttgggttattagag
tacaatcctgatatattagcagaattgcagaataagattaaatatattatgattgatgaa
tatcaagatactaatactattcaagaacgtcttattctattactagctgacaaacacaaa
aatatttgtgttgttggagatgatgatcaaagtttatatcgttttcgaggagcttctata
cgcaatattttagagttttctacacactttgaaaaagggacttgtaaaaaggttacatta
gataccaattatcgttcacaccctgatattatcaatttctataacaggtttatgaacaga
cataattggaatcataatggtaaaactttcagatacgaaaagactatcaaaccaaatgat
ggtgaatatccaaacattcctgctgtaatcaaagtatctaaacataatgataaagaagct
tatcatcaagaagtttataatttcatcaaagatttaaaagataagggtgtactgactgat
tacaatcaaatagcatttctattcaaatctgttcaaagtgaccaagccattggattagct
gaatttttagaagataagggcatacctgttttctcaccacgttccaagatgttttttgaa
cgtgaagaaatacgtttgctgattggtgcatttgttaccatatttcctaacctatttcaa
cgtctgaaatggaatgatacagcagaattggatatatggtattattatagaggttgtcaa
gtagaatttatgaatgagtttacgaaagactcacaaactcacaaaacactttataagtgg
actttgagtaagatgaaagctcatactaacttttctcaaagtaccaactatgcatttgct
gcccttttgtatcaacttcttgaatttccaatgttttcaaaatatttggatgtcaaccta
caagaaaagaaaacagacctgagagcaacatataatatcgctatgttctccaaactatta
tttaagtttgaacatacctataatatcactgtttttacagaaaagaatattgacagaaca
ttaaaagaattgtttaataaattcttacgatttttgaaggaaggtggtcttgaagaatat
gaagactttgaagaatacgctccctcaggttgtatttcatttatgactattcaccaatcc
aaagggcttgaattccctattgttattgttggttcattaaacgcatcaccacgagaacaa
tatgatgatattgacttgaaacttcaatcagactactatcacaagccacccttcgaacct
attaaaaaaactaagtattatgacttttacaggttgttttatactgctttttcaagacct
cagaacctattggtattatcagcttgtacaagagagggacaaggacgcacaccatccaaa
cattttgcggatacttttaataaattgccatcttggacagatgaacgttttaaacccgaa
ttgcttgaattagaaaacctaaaacccatcaatataaagcatgaatatgcttttacatcc
gatatcttattatatgaaaactgtcctttacaatataaattctataaagaattaggattt
gttgaagttcgtacagggggcgttttagggggtagtttattacatcaaacgattgaagat
attcatcgtgcagtattgaagaaagaagaaaataagctcactaattataatataaccgat
tggtttaatcgtaattatcaactattatccaaacagcaaagaagttatctacaccaagga
cagcttaacgcattgttgaaacaggtgttaaggtatcgtgaccgcaatcagagtcgttgg
aatttgatattagaaaccgaagttgatgtgtctttggtaaaagaagattatattctgaaa
ggaactatcgaccttataaagggtgataatgaaacagtagaattggtagactttaagtca
ggagataaacctgatgtaaactcaacagaccctaaagtgcgaaaattgttgaaccaatac
caacgtcaattggaagtttatgcacatattatcgaaaaaaacaaaggtgtaaaaataagt
aaactgcatttgtactacccaaaagaagatgatggtattccatacattacttttaaagca
aatatagataacataaacgctacgattgatatattttctgaggtagtaaacagaatagaa
tcaaaagattacgatatgagtcgtacgcctaaaggtgaaaagcaatgcggtgaatgtgat
atgcgatattattgtaatccacatacgtttagtgaataa
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