Apibacter sp. B2966: G8C43_08065
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Entry
G8C43_08065 CDS
T06471
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
apib
Apibacter sp. B2966
Pathway
apib03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G8C43_08065 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apib03019
]
G8C43_08065 (pnp)
03016 Transfer RNA biogenesis [BR:
apib03016
]
G8C43_08065 (pnp)
Enzymes [BR:
apib01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G8C43_08065 (pnp)
Messenger RNA biogenesis [BR:
apib03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G8C43_08065 (pnp)
Transfer RNA biogenesis [BR:
apib03016
]
Prokaryotic type
tRNA degradation factors
G8C43_08065 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
PCB_OB
PDDEXK_4
S1_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
DUF2764
DUF2129
Motif
Other DBs
NCBI-ProteinID:
QII72723
LinkDB
All DBs
Position
complement(1884789..1886936)
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AA seq
715 aa
AA seq
DB search
MEIPKAITEKIVLDDGREIILETGKLAKQADGSVVVTCGGTMLLATVVAAKEANPGVDFL
PLTVDYRDKFSAGGRIPGGFMKREGRPTDEEILTMRLVDRVLRPLFPDDFHAEIQVMIQL
ISYDGSILPDSLAGLAASAAISITDIPFNGPISEVRIIRHNGKYIINPSLAQMDEGFDLD
IMVGASKDSIVMIEGEMSEISEKDMIDAISVAHEAIKKQIDAEERLAAKVGKSQPKREYC
HETHDEELRSAITEFSYQKIYDIAKTPSEKHERSEKFDAVLEEFLSRYTEEELEEKKSLA
ATYFHDVQKDAVRQLILNEGIRLDGRDTKTIRPIWCEVNYLPGSHGSAIFTRGETQSLTT
VTLGSSLDANRVDNVISQHEEKFYLHYNFPPFSTGEVRPVRGVSRREIGHGNLAQRALKY
VIPKDSPYTIRVVSDILESNGSSSMATVCAGTLALMDAGIKIKKPVSGIAMGLITDKESG
KWSVLSDILGDEDHLGDMDFKVTGTADGITACQMDIKIQGLSFEIMEKALNQAKEGRLHI
LGKILETISAPNDHLKPNAPKLVSLEIPKDFIGAVIGPGGKIIQQLQKDTDTVITIEESN
DVGKVEISGVDQTKIDEAIEKIKQIAFVPEVGATYKAKVVSIKPFGAFVEISKGVEGLVH
ISELEWRRLEKVEDSVKLGDIIEVKYLGVDDKKKIKLSRKVLLPKPEKKDSESKK
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atggagattccaaaagcaattacagaaaaaattgtcttggatgatggaagagaaatcatc
ttagaaaccggaaaacttgctaaacaagcagatggctctgtggtagttacatgtggtgga
accatgttattagcaacagtagtggctgcaaaagaggctaatcccggagtagattttcta
cctcttacagtggattacagggataaattctcagccggaggacgtattccgggtggattt
atgaaaagagagggaagaccaacggatgaagaaatactaaccatgcgattggtagaccgt
gttctacgccctttatttcccgacgactttcatgccgaaatacaggtaatgattcaactt
atttcgtacgatggctccatacttcccgattcattagcaggactagcggcttcagcagct
ataagcatcactgatattccttttaacggaccaatttctgaagttcgaattattcgccat
aacggaaagtacatcattaatccgagccttgctcaaatggatgaaggatttgatcttgat
ataatggtgggtgcttccaaagattcaattgttatgattgaaggagaaatgagtgaaatt
tctgaaaaagatatgatcgatgcaatttcagtagctcatgaagccattaaaaaacaaatt
gatgctgaagaaagattagccgctaaggttggaaaatctcagcctaaaagggaatattgc
catgaaactcatgatgaagaattaagaagtgctattacagaattttcttatcaaaaaatt
tatgatatagccaaaacaccttctgaaaaacatgagagaagcgaaaaatttgatgctgtt
ttagaagaatttttatcaagatatactgaagaagaattagaagaaaaaaaatctttagcc
gctacttattttcatgatgtacaaaaagacgctgttagacaacttatattaaatgaaggc
attcgtttagatggtagagacacaaaaactatccgacctatttggtgtgaagttaattac
cttccgggatctcacggatcagccatttttacacgcggtgaaactcaatcattgactact
gttaccctaggttcttcattggatgccaatcgagtggacaatgtaatatctcaacacgaa
gaaaaattctatttacattataatttcccgccattttcaaccggtgaagttagaccggta
agaggggtttctcgtagagaaataggtcatggtaatttagctcaaagagccttaaaatat
gttattccaaaagattctccgtatactatacgtgttgtttccgatattttagaatctaac
ggttcttcttcaatggcaactgtttgcgcaggaacattagcattaatggatgcgggtatt
aaaataaagaaacctgtatccggtatagccatggggttaatcactgataaggaatcaggc
aaatggagcgttctttctgatatacttggagatgaagaccatttaggagatatggacttt
aaagtaaccggtactgctgacggtattaccgcttgccaaatggatattaaaattcaaggg
ttatcttttgaaattatggaaaaagctttgaatcaagcgaaggaaggacgtttacatatt
ttaggtaaaatattggaaaccatctccgctcctaatgatcatttgaaacccaatgcacct
aaattggtatctttggaaattcctaaagactttattggcgctgttatcggacccggagga
aaaatcattcaacaacttcaaaaagatacagacactgtaattacgattgaagagagtaat
gatgtaggaaaagttgaaatatcgggagttgatcaaaccaaaattgatgaagcaattgaa
aaaattaaacaaatagctttcgttcctgaggttggagctacttacaaagctaaagtggtt
tcaataaaaccttttggagcatttgttgagatttctaaaggtgttgaaggattggttcat
atttccgagttagaatggagacgtttggaaaaagttgaagattccgttaagcttggagat
atcattgaagtgaaatatttaggtgtagacgataagaaaaagattaaactttcaagaaaa
gtcttattacccaaacctgaaaaaaaggattctgaaagtaaaaaataa
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