KEGG   Arcanobacterium pinnipediorum: NG665_03165
Entry
NG665_03165       CDS       T08401                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
apii  Arcanobacterium pinnipediorum
Pathway
apii03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:apii00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NG665_03165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:apii03019]
    NG665_03165
Messenger RNA biogenesis [BR:apii03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NG665_03165
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Lactamase_B_6
Other DBs
NCBI-ProteinID: USR80228
LinkDB
Position
720376..721965
AA seq 529 aa
MTVFELNGRILIVDCGVLFPEESQPGVDLILPDFDYIRDRMDDVDAIILTHGHEDHIGAV
PYLLRLRNDIPIIGSELTIALIEAKLAEHRIKSYVMVVQEGDVEQIGPFECEFIAVNHSI
PDALAVAIRSVAGTILHTGDFKMDQLPLDGRITDLRTFARLADEGIDLFMVDSTNAEVPG
FVRSEGEIGPVLESVFAQASGQIVVASFASHVHRVQQVLNAAAKFNRKVCFVGRSMVRNM
GIAEELGYLDVPDNVLIDLKNAHSVAPEQIVYMSTGSQGEPMAVLSRIASGSHKSISVGP
NDTVIFASSMIPGNENSVFRLINGLTKLGARVVHQGNAKVHVSGHSAQGELLYCYNIVEP
EFVMPVHGEPRHLVANGAIAVKTGVPAAHVLLTEDGSVVDMHDGKCAIVGEVPCGHVYVD
GSSVGEITEAELTDRLTLGEEGFIAVFAVVDGQKRAIIAGPHIQARGMAEDDSVFDNILP
KVTQALEEAIASEGATTYHMQQAMRRVLGRWAAKSLRRSPLIIPTVIEA
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgaccgtctttgaactcaacggtcgtatccttattgttgactgcggcgtgctcttccca
gaagaatcccagcctggtgtggatctgatccttccagactttgactacattcgagaccgg
atggacgacgtcgacgccattattctcacccacggtcacgaagatcatatcggcgctgtt
ccataccttttgcggttacgaaacgatattccgattattggttcggaactgactattgcg
ctcatcgaggccaaacttgccgaacatcgcatcaagtcgtatgtgatggttgtccaagag
ggcgacgtcgaacaaatcggtccatttgaatgcgaatttatcgccgtcaaccactccatc
ccagatgcgcttgcggtagcgattcgttcggtagctggaacgattttgcacacgggtgat
tttaagatggatcagttgcccctcgatggtcgcatcactgacctgcgcacgttcgctagg
ctcgctgatgaaggtatcgacctattcatggttgattccacgaacgctgaagtgcccgga
ttcgtgcggtccgaaggcgaaattgggccggtgctcgaaagcgttttcgcgcaagcatct
ggtcaaatcgtggtggcatcttttgcttcgcacgtccaccgcgtccaacaagtactcaac
gcagccgcgaaatttaaccgcaaggtgtgtttcgtggggcgctcgatggtgcgcaacatg
ggaattgctgaagaactcggctatctcgatgtccctgataacgtgctcattgatttgaag
aatgcgcactcggttgcaccagagcaaatcgtctacatgtctaccggttctcagggcgaa
ccgatggctgtgctctctcgtattgccagcggtagccacaagtcgatttcggtggggcca
aacgataccgtcattttcgcctcctcgatgattccaggcaacgaaaactctgttttccgg
ttgattaacgggttgacgaaactcggtgcgcgcgtcgtccatcaaggaaacgcgaaagtc
cacgtttcgggccactctgcgcaaggggagttgttgtattgctacaacatcgtcgaaccc
gagttcgtcatgccagtacacggcgaaccacgtcacctagtggccaatggagctatagcg
gtcaagaccggtgttccagcagcacacgttttactcaccgaggatggctcggttgttgat
atgcatgacggcaagtgtgccatcgttggcgaagtgccctgcggtcacgtctatgttgat
ggatcgtcggtcggtgaaatcaccgaagctgaactcactgatcgcttaacgctcggcgag
gaaggcttcatcgccgtctttgctgtagttgacgggcaaaagcgcgcgattatcgccggc
ccacatattcaagcgcgcggaatggcagaagacgattccgtctttgataatatcttgccc
aaggtcactcaagcccttgaagaagcaatcgcttccgaaggtgcaacaacctaccatatg
cagcaagctatgcgtcgggttttgggccgctgggcggccaagtcgcttcgccgttcgccg
ctgatcattccaacggtgatcgaagcctaa

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