Arcanobacterium pinnipediorum: NG665_03440
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Entry
NG665_03440 CDS
T08401
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apii
Arcanobacterium pinnipediorum
Pathway
apii03030
DNA replication
apii03430
Mismatch repair
apii03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NG665_03440 (dnaE)
03430 Mismatch repair
NG665_03440 (dnaE)
03440 Homologous recombination
NG665_03440 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apii03032
]
NG665_03440 (dnaE)
03400 DNA repair and recombination proteins [BR:
apii03400
]
NG665_03440 (dnaE)
Enzymes [BR:
apii01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NG665_03440 (dnaE)
DNA replication proteins [BR:
apii03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NG665_03440 (dnaE)
DNA repair and recombination proteins [BR:
apii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NG665_03440 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF655
DNA_pol_IIIA_C
LCAT
Motif
Other DBs
NCBI-ProteinID:
USR80041
LinkDB
All DBs
Position
782960..786508
Genome browser
AA seq
1182 aa
AA seq
DB search
MAGKNFAHLHVHTDYSLLDGAAKINKLVAEVARLEQPAVAITDHGYLFGAYEMYKAASAA
GIKPIIGLEAYMTPGTSRFDQTRQLWGSPGQRADDVSARGAYTHMTLLSENNTGMHNLFR
MNSLASLEGQMGKWPRMDRELLETYHEGLIGTAGCPSGEVQTRLRLGQWDEALKAAGELQ
DIFGKDNFFIEVMDHGLEIERRVQKDLLKIAKMIDAPLIATNDSHYVKREDRDIQDAMLC
INSGSTLMDPDRFKFDGDGYYIKSSEEMWRQFEDLPQAVENTLLIAERCNVSFQTTADGI
SYMPAFPVPPGEDETSWFINQVEAGLLKRYNGSIPQHVRERADYEVGVITSMGFPGYFLV
VSDYIKWAREHGIRVGPGRGSGAGSMVAYALEITQLDPIKHDLLFERFLNPERVSLPDID
VDFDDRRREEVIRYVEQKYGTDKVAQVVTYGTIKTKQALKDAARVLGMPFQMGDQLTKAL
PPDVQGKSIAVKDIYDPQASRYNEAGEFREFVEANAEARRVYDFALGLEGMTRQTGVHAC
AVIMSSKSLTDVIPVMKRLQDGAIITQFEYPQCEELGLVKMDFLGLSNLTVIEGALANIR
QNGKQAPDIDAIPLDDKETYELLGRAETLGIFQLDSPGMRQLLKQMKPDTFGDISAVSAL
YRPGPMGANSHTNYALRKNGLQEKTPIHPELATALEDILGTTHGLIVFQEQVMRIAQKLA
GFTLGQADILRKAMGKKKADVLQQQFKGFAQGMRDHGYSDHAINTLWEILVPFAQYAFNK
SHSEAYALVTYQTAYLKAHYPSEYMAALLTSNQNNKTKVATYLADSRRMGIRVNVPDVNK
SMDVYSAVGDEVRVGLSSVRNVGKNVVEGIIKTRHERGEFTSFQDFLDKVPASVLNKRAI
ECLIKAGAFDSLGYSRRALVAIHDEAIEAVLPVKRNEAGGQFDLFGGLGEDNPIAQSFNV
DVPDLPEWDKKEKLNIERDMLGLYVSDHPLSGLEAFLDRAADHTILGIQNDENPVDGHIV
TVAGLITTVQTRISQKNGKTWATATIEDFTGSIEVNFFPATYQSVSQFLIPDTVVTIKAR
MSVRENGVQLNAMDMNVPQLTGMAEDTPLDIQIPERMLTQQMMQKLSDTLAQYPGKAPIR
VHVRQMGKTTVVQLHDAYKVNVNPSLLSSLRVLLGKNALMTQ
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggctggaaaaaacttcgcgcacttacatgttcataccgattattcgttgcttgatgga
gcagcgaaaattaataagcttgttgctgaagttgcgcgcttagaacagcctgcggtggca
attactgatcatggctatctttttggcgcatacgaaatgtataaggcggctagtgctgct
gggattaagccaattattggccttgaagcctacatgaccccaggtacgtcacgctttgat
caaacacgccagttgtggggaagtcctgggcaacgtgctgatgatgtctcagctcgagga
gcctatacgcatatgacgttgctgtcggaaaataatactggcatgcataatcttttccgg
atgaactcccttgcttccttagaagggcagatgggtaaatggccgcggatggatcgagaa
ttattagagacataccacgaaggtttaatcggtactgccggatgtccttcaggtgaagtc
cagacgcgcttgcgcttggggcaatgggatgaggcgttaaaagctgctggtgaacttcaa
gatatttttggcaaagacaatttctttattgaagtgatggatcacgggctagaaattgag
cgtcgagtacaaaaggatctgctcaagatcgccaaaatgattgatgcgcccttaatagcc
accaatgattcccattatgttaagcgcgaagatcgcgatattcaagatgctatgttgtgt
atcaattccggttcgacgctaatggatccagatcgattcaaattcgatggtgatggctac
tatataaagtcctctgaagagatgtggcgtcagtttgaagatctaccgcaggcggtagaa
aatacgttgctgatcgcagaaagatgtaacgtatccttccaaactactgctgatggaatc
agctatatgccagcatttccagttccacctggcgaagatgaaacatcgtggtttatcaac
caggtagaagccggtttgcttaaacgctacaacggttccattccccaacatgtgcgtgaa
cgtgctgattacgaagtcggcgtcatcacctcgatggggttcccgggctacttccttgtt
gtttctgactacattaagtgggctagagaacacggcattcgagttggccctggtcgtggg
tcgggtgctggatcgatggtggcttatgctcttgaaattactcagcttgatccaatcaag
catgatttgcttttcgaacgtttcttaaacccagaacgtgtttctctgccagatatcgac
gttgatttcgacgatcgtcgtcgtgaagaagtaatccgatacgttgaacaaaagtatggt
acagacaaagttgcccaagttgtcacctacggaacgatcaaaactaagcaagcgttaaaa
gatgctgcgcgagttttggggatgccgttccagatgggcgatcagcttaccaaggcactg
ccaccagatgtgcaaggaaaatcaatcgcagtcaaagatatctacgatccacaagcctcg
cgctataacgaagctggtgagttccgggaatttgtggaggcgaatgctgaagctagacga
gtatatgattttgcacttggcttagaaggcatgacacggcaaactggcgtccacgcgtgt
gcagtgattatgtcatcgaagtcgttaactgacgtcatcccagtgatgaaacgcctccaa
gatggtgccatcattacccaattcgaatatccgcagtgtgaagaattgggcttggtgaag
atggacttcttgggtttgtctaatttgactgttatcgaaggtgcactggcaaacatccga
caaaacggtaaacaagctcccgatattgatgctattccactcgatgataaagaaacatac
gaactattgggacgagcggaaacattaggcattttccagctcgattctccaggaatgcgt
caactgcttaaacagatgaaacccgatacctttggcgatatttcggcagtttcagcgctt
tatcgccccggtccgatgggagcaaattcgcatacgaactatgcgctgcgcaagaacgga
ttacaagaaaagacccctattcatcccgagctagctacagctcttgaagacattcttggt
accacgcacggtttaattgttttccaagaacaagttatgcgtattgcacaaaagctcgct
gggttcactttaggacaagcagatattttgcgtaaagcaatgggtaaaaagaaagccgat
gtccttcagcaacaatttaaaggttttgcccaagggatgcgcgaccatggttattcagat
catgcgattaacaccttgtgggagattcttgttccctttgcccagtatgcgtttaacaag
tctcattccgaagcatacgctttagtcacctaccaaactgcttacctcaaggcacattat
cccagtgaatacatggcggcattgctcacgtcgaatcaaaataataagactaaggttgcc
acgtatctagcagatagtcgccgaatgggaattcgggtgaacgtaccggatgttaataag
tcaatggatgtttattctgccgttggtgacgaagttcgagtgggcttgagttcagttcgt
aatgttggcaaaaatgttgttgaaggtattattaagacccgccatgaaaggggagaattc
acctccttccaggatttcttggataaggttcctgcctcggtgctcaataagcgcgcgatc
gaatgcttgattaaagccggcgcatttgattcgctgggatattcgcggcgagcattggtt
gcgattcacgatgaagcaattgaagctgttcttccagttaagcgaaacgaagcaggcgga
caattcgacctctttggtggcttgggtgaagataacccgatcgcgcaatcttttaacgtt
gatgtgccagatttaccggagtgggataagaaagaaaagcttaacatcgaacgcgatatg
ttaggactctatgtttcggatcatccactatctgggctagaagcattccttgaccgggcg
gcagatcacacgattttaggtatccaaaacgatgaaaatcctgttgatggacacattgta
acggttgctggccttatcacgacggttcaaacccgtatctcgcaaaagaacgggaaaact
tgggctactgcgacgattgaagactttactggttctatcgaggttaatttcttcccagca
acctatcagtctgtttcgcagttcctcatccccgatacggttgtcactattaaagcgcga
atgtcagtgcgtgaaaatggtgtccaactcaatgcgatggatatgaacgttccccagcta
acgggtatggcagaagatactccgctagatattcagattccagaacgaatgctgactcag
cagatgatgcaaaaactttccgatactttggctcagtatccggggaaggcaccaattcga
gtccatgtacgtcaaatggggaaaacaactgttgttcagctacacgatgcatataaggtc
aacgtcaacccgtcgttgctatcgagtctacgagtattgctgggcaagaatgccctgatg
acgcaatag
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