Candidatus Annandia pinicola: GFK87_00052
Help
Entry
GFK87_00052 CDS
T07601
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
apin
Candidatus Annandia pinicola
Brite
KEGG Orthology (KO) [BR:
apin00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apin03016
]
GFK87_00052 (truB)
Enzymes [BR:
apin01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GFK87_00052 (truB)
Transfer RNA biogenesis [BR:
apin03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GFK87_00052 (truB)
Prokaryotic type
GFK87_00052 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
Asp23
DUF7067
Motif
Other DBs
NCBI-ProteinID:
UDG80289
LinkDB
All DBs
Position
50914..51813
Genome browser
AA seq
299 aa
AA seq
DB search
MIKMKKKKKNINGVVLLNKDKKFFLNKILNKIKNNKKIEKYEYVSNLDPLTTGILPICFG
KSLNFSKFIINSNKKYHIIIKLGEYSDDEDDYNNYIYCIDYYFLKNENNNFRNYILHYIF
KKMMDKCYNNNSNMIKKKDIIKIYSVELIKFKDNFIELMIHCSKGTSIRSIINKIQKKIR
HNIYIKFIKIIRLSYFLINNTIELKYFYEKIYKKNKICNIKKTLLPIDTAVSNLPILNID
HDLSKFLIKGNKVLIKKNIRFLPNNMYRITTDNQKKFIGVFELEYGYIIPNKFKKNKRY
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgaaaaaaaaaaaaaaaaatataaatggtgttgttttattaaataaagat
aaaaaattttttttaaataaaattttaaataaaattaaaaataataaaaaaattgaaaaa
tatgaatatgttagtaatttagatccattaactactggaatacttccaatttgttttgga
aaatccttaaatttttcaaaatttataattaattcaaataaaaaatatcatattattatt
aaattaggagaatatagtgatgatgaagatgattataacaattacatatattgtatagat
tattattttttaaaaaatgaaaataataattttagaaattatatattacattatattttt
aaaaaaatgatggataaatgttataataataattctaatatgataaaaaaaaaagatata
attaaaatttattcagttgaattaataaaatttaaggataattttatagaactaatgatt
cattgttctaaaggaactagtattcgttcaataattaataaaattcaaaaaaaaattaga
cacaatatttacattaaatttataaaaattattcgtttatcatattttttaataaataat
acaatagaattaaaatatttttatgaaaaaatatataaaaaaaataaaatttgtaatata
aaaaaaacattattaccaatagatactgcagtatcaaatcttccaatattaaatatagac
catgatttatcaaaatttttaattaaaggaaataaagtattaataaaaaaaaatattaga
tttttaccaaataatatgtataggattactacagataatcaaaaaaaatttattggtgta
tttgaattagaatatggttatattattcctaataaatttaaaaaaaataaaaggtattaa
DBGET
integrated database retrieval system
