Candidatus Annandia pinicola: GFK87_00213
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Entry
GFK87_00213 CDS
T07601
Symbol
ffh
Name
(GenBank) Signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
apin
Candidatus Annandia pinicola
Pathway
apin02024
Quorum sensing
apin03060
Protein export
apin03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
apin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GFK87_00213 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GFK87_00213 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GFK87_00213 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
apin02044
]
GFK87_00213 (ffh)
Enzymes [BR:
apin01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GFK87_00213 (ffh)
Secretion system [BR:
apin02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GFK87_00213 (ffh)
Eukaryotic Sec-SRP protein
GFK87_00213 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
DUF6842
AAA_22
dsDNA_bind
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UDG80427
LinkDB
All DBs
Position
213952..215301
Genome browser
AA seq
449 aa
AA seq
DB search
MFGKLSKSLIKIVNIIKNYKIINKDLISSILDKLKNILLESDVSVKVIDKFIIKIKKDFK
HYINNINQNLGKILINIIKKELINILSYKNIEINLSDKKISIILLVGLQGVGKTITTIKL
GKLIKKKYNKKVLLTSVDVYRPAGIKQLYKLSIINNIDFFKSNKKQKPIDIIKLILRNIK
NKDYDVLIIDTPGISYSNENIKTEIKKIYDLVKPIETLLVFDSMTGQNSVNISKIFKKFL
KITGIFLTKVDSDTKGGSALSICDIIKKPIKFLGIGEHSNDIEKFHPDRIVSRILGMGDI
ESLIEEVKDKIKLKDTNKILYKINKGIDFNLNDFLEQIKQINKMGGINSILEKFPFLDKK
FNFDEKKLIIIENVINSMTKMEKEYPHIINISRINRISLGSGVKKKDVKNVINQFYYMKN
IMKKIKGANIKQIIKNLKNILPENIKNFF
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtaaattgtctaaaagtttaattaaaatagttaatattattaaaaattataaa
ataattaataaagatctaatatcttcaattttagataaattaaaaaatattttattagaa
tctgatgtatctgttaaagttatagataagtttattataaaaattaaaaaagattttaaa
cattatataaataatattaatcaaaatttaggaaaaattttaataaatattataaaaaaa
gaattaattaatattttaagctacaaaaatattgaaattaatttatctgataaaaaaatt
tctataattttattagttggtttacaaggggtaggaaaaactattactacaataaaatta
ggaaaattaataaaaaaaaaatataataaaaaggttttattaacatcagtagatgtttat
agacctgcaggtataaaacaattatataaattatctataataaataatattgattttttt
aaatcaaataaaaaacaaaaaccaattgatataattaaattaattttaagaaatataaaa
aataaagattatgatgttttaattatagatactcctggaatatcatattctaatgaaaat
attaaaactgaaataaaaaaaatttatgatttagttaaacctattgaaacattattagtt
tttgattctatgacaggacaaaattcagttaatatatctaaaatatttaaaaaattttta
aaaattactggtatatttttaactaaagttgacagtgatactaaaggaggttctgcttta
tcaatatgtgatattattaaaaaaccaattaaatttttaggaattggagaacatagtaat
gatattgaaaaatttcatccagatagaatagtttctagaattttaggtatgggggatatt
gaatctcttatagaagaagttaaagataaaattaaattaaaagatacaaataaaatttta
tataaaattaataaaggtattgattttaatttaaatgattttttagaacaaataaaacaa
ataaataaaatgggtgggataaatagtattttagaaaaatttccttttttagataaaaaa
tttaattttgatgaaaaaaaattaattattatagaaaatgttattaattctatgactaaa
atggaaaaagaatatcctcatattattaatatttctagaataaatcgtatttctttagga
tcaggtgttaaaaaaaaagatgttaaaaatgtaataaatcaattttattatatgaaaaat
ataatgaaaaaaattaaaggtgctaatataaaacaaattattaaaaatctaaaaaatata
ttaccagaaaatataaaaaattttttttaa
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