Candidatus Annandia pinicola: GFK87_00226
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Entry
GFK87_00226 CDS
T07601
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apin
Candidatus Annandia pinicola
Pathway
apin03030
DNA replication
apin03430
Mismatch repair
apin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFK87_00226 (dnaQ)
03430 Mismatch repair
GFK87_00226 (dnaQ)
03440 Homologous recombination
GFK87_00226 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apin03032
]
GFK87_00226 (dnaQ)
03400 DNA repair and recombination proteins [BR:
apin03400
]
GFK87_00226 (dnaQ)
Enzymes [BR:
apin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFK87_00226 (dnaQ)
DNA replication proteins [BR:
apin03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFK87_00226 (dnaQ)
DNA repair and recombination proteins [BR:
apin03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFK87_00226 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UDG80436
LinkDB
All DBs
Position
222405..223079
Genome browser
AA seq
224 aa
AA seq
DB search
MRQIVLDTETTGINKNGKLYQGHKIIEIGAVEIIDRKITGNNFHTYLNPERSIDLEAFKI
HGISNKFLKNKPYFKDIYSLFLEYILNSELIIHNAIFDIKFLENELYLLFNKKKKISDLC
NIIDTLSIARKLFPGKKNNLDALSKRYKIKIKRNKHGALNDALILSKIYLHMTSGQTSLN
FFFNKKKKVKKKNIINNLKIIYANKKELIEHRKYMKLIKKKINK
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcaaattgttttagatactgaaactaccggtattaataaaaatggtaaattatat
caaggacataaaattattgaaattggtgcagtagaaattattgatcgtaaaataacaggt
aataattttcatacatatttaaatccagaaagatcaatagatttagaagcatttaaaata
catggaatatcaaataaatttttaaaaaataaaccatattttaaagatatttatagttta
tttttagaatatattttaaattcagaattaataattcataatgctatttttgatattaag
tttttagaaaatgaattatatttattatttaataaaaaaaaaaaaatatctgatttatgt
aatattatagatactttaagtatagcacgtaaattatttcctggaaaaaaaaataactta
gatgctctttctaagcgttataaaattaaaatcaaaagaaataaacatggagctttaaat
gatgctttaatattatctaaaatatatttacatatgactagtggacaaacatcattaaat
tttttttttaataaaaaaaaaaaagtaaaaaaaaaaaatataataaataatttaaaaata
atatatgctaataaaaaagaattaatagaacatagaaaatatatgaaattaataaaaaaa
aaaattaataaataa
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