| Entry |
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| Symbol |
rho
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| Name |
(GenBank) Transcription termination factor Rho
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| KO |
| K03628 | transcription termination factor Rho |
|
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| Organism |
apin Candidatus Annandia pinicola
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:apin00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFK87_00263 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:apin03021]
GFK87_00263 (rho)
03019 Messenger RNA biogenesis [BR:apin03019]
GFK87_00263 (rho)
Transcription machinery [BR:apin03021]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
GFK87_00263 (rho)
Messenger RNA biogenesis [BR:apin03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GFK87_00263 (rho)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(262309..263865)
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| AA seq |
518 aa
MINFVGIRKFNRLEKILNVVINIKHKTIRLFPRYIIIFFMLKINIKIGIIMLGSGIIEIV
NLKFGFLRSIYNNYYSGINDIYISLRKIKKFSLKTGDMIIGKIIPPGFYERYFSLIDIIT
INSNIPKISITRVDFDSLVPLYPNFHLNMEREIKEEIKKEENKEKIEENKEENKEENKKE
IEEKIEENKEENKEKIEENKEENKKEIEENKEETEEEREKRKKKEEERREKEKEKIKKEK
RKKLIYDNIASRILDLITPIGNGQRGLIVAPPKAGKTILLQNIADSISYNYKNHFLIVLL
IDERPEEVTEMKKLIKGEVLYSTFDEPAYKHIHISEIIIEKAKRMVENSNNVVILLDSLT
RLTRAYNSIIPSSGKTLTGGVDSNSLYRPKRFFGSARNFQEGGSLTIIATILIKTGSKMD
EIIYEEFKGTGNMELHLSRKIANKRVFPAIDYIKSSTRKEELLIKCNELEKIYLLRKILS
FMNKVDAIRFLLKNIKKTKNNKILLNNLKRQLKNNLII |
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| NT seq |
1557 nt +upstreamnt +downstreamnt
atgatcaattttgtaggaataagaaaatttaatagattagagaaaatattaaacgttgtt
atcaatataaaacataaaacaataagattatttcccaggtatataattattttttttatg
cttaaaattaatattaaaattggtattataatgttaggtagtggtattatagaaatagta
aatctaaaatttggttttttaagatctatatacaataattattactcaggaataaatgat
atatatatatcattaagaaaaataaaaaaatttagtttaaaaacaggtgatatgataatt
ggaaaaattataccaccaggtttttatgaacgttatttctcattaatagatattataact
ataaattctaatataccaaaaataagtattacaagagttgattttgatagtttagtacca
ctatatcctaattttcatttaaatatggaaagagaaataaaagaagaaataaaaaaagaa
gaaaataaagaaaaaatagaagaaaataaagaagaaaataaagaagaaaataaaaaagaa
atagaagaaaaaatagaagaaaataaagaagaaaataaagaaaaaatagaagaaaataaa
gaagaaaataaaaaagaaatagaagaaaataaagaagaaacagaagaagaaagagaaaaa
agaaaaaaaaaagaagaagaaagaagagaaaaagaaaaagaaaaaataaaaaaagaaaaa
agaaaaaaactaatttatgataatatagcttctcgtatattagatttaataactcctata
ggtaatggccaaagaggtttaattgttgctcccccaaaagcaggtaaaactattctttta
caaaatattgctgatagtatttcttataattataaaaatcattttttaattgtattgtta
atagatgaaagacctgaagaagtaactgaaatgaaaaaattaatcaaaggagaggtatta
tattctacttttgatgaaccagcatataaacatatacatatttcagaaataattattgaa
aaagcaaaaagaatggttgaaaatagtaataatgttgtaatattattagattccttaacc
agattaactagagcttataattctataattccaagttctggaaaaactttaactggagga
gttgattcaaattctttgtatcgtcctaaaagattttttggatcagctagaaattttcaa
gaaggaggtagtttaactattattgctactattttaattaaaacaggttctaaaatggat
gaaataatctacgaagaatttaagggcacaggaaatatggaattacatctttctagaaaa
atagctaataaaagagtttttccggcaatagattatattaaatcaagtactaggaaagaa
gaattattaattaaatgtaatgaattagaaaaaatatatctattaagaaaaatattaagt
tttatgaataaagttgatgcaataagatttttattaaaaaatataaaaaaaactaaaaac
aataaaattttgttaaacaatttaaagcgtcaattaaaaaataatttaataatttaa |
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