Candidatus Annandia pinicola: GFK87_00327
Help
Entry
GFK87_00327 CDS
T07601
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
apin
Candidatus Annandia pinicola
Pathway
apin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GFK87_00327 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apin03019
]
GFK87_00327 (groL)
03110 Chaperones and folding catalysts [BR:
apin03110
]
GFK87_00327 (groL)
03029 Mitochondrial biogenesis [BR:
apin03029
]
GFK87_00327 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apin04147
]
GFK87_00327 (groL)
Enzymes [BR:
apin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
GFK87_00327 (groL)
Messenger RNA biogenesis [BR:
apin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
GFK87_00327 (groL)
Chaperones and folding catalysts [BR:
apin03110
]
Heat shock proteins
HSP60 / Chaperonin
GFK87_00327 (groL)
Mitochondrial biogenesis [BR:
apin03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
GFK87_00327 (groL)
Exosome [BR:
apin04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GFK87_00327 (groL)
Exosomal proteins of other body fluids (saliva and urine)
GFK87_00327 (groL)
Exosomal proteins of breast cancer cells
GFK87_00327 (groL)
Exosomal proteins of colorectal cancer cells
GFK87_00327 (groL)
Exosomal proteins of bladder cancer cells
GFK87_00327 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UDG80519
LinkDB
All DBs
Position
308692..310341
Genome browser
AA seq
549 aa
AA seq
DB search
MTSKEIKFGNDARSKMLRGVNLLADAVKVTLGPKGRNAVLDKSFGAPIITKDGVTVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATLLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVISAVKELKLISVPCENSKSITQVGTISANADENVGKLISQAMSKVGKEGVITVEEG
TGLEDELDVVEGMQFDRGYLSPYFINKQENGTVELDHPYILLVDKKISSIRELLSILERV
AKSNKPMLIIAEDIEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKSMLQDIAILTGGTV
ISEEIGLELDKINIESLGQSKKIVINKDNTTIIDGLGKDSAIKNRVKQIYQQIKNATSDY
DKEKLQERVAKLAGGVAVLKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASRIINMSGDNEDQNVGIRIAIKAMEAPLRQIVANAGEEPSVVANAVKGGKGNYGYNA
ATAEYGNMIKFGILDPTKVTRSALQYAASVAGLMVTTECMITDLPKEDKSDINNMSGPSG
GIGGMNNMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctaaagaaattaaatttggtaatgatgctagatcaaaaatgttaagaggtgtt
aatttattagctgacgcagttaaggttactttaggcccaaaaggacgtaatgctgtattg
gataaatcttttggagctcctattattactaaagatggtgtaactgtagcaagagaaata
gaattagaagataaatttgaaaatatgggtgctcaaatggtaaaagaagttgcatctaaa
gcaaatgatgctgctggtgatggtactacaacagcaactttattagcacaatctattgta
aatgaaggtttaaaagcagttgctgcaggtatgaatcctatggatttaaaaagaggtata
gataaagctgtaatatcagctgtaaaagaattaaaattaatttcagtaccttgtgaaaat
tctaaatctattacacaagtaggtactatatcagctaatgctgatgaaaatgttggaaaa
ttaatatcacaagcaatgagtaaagttggaaaagaaggagttattacagttgaagaaggt
actggtttagaagatgaattagatgtagtagaaggaatgcaatttgatagaggatattta
tctccttattttataaataaacaagaaaatggaactgtagaattagatcatccttatatt
ttattggtagataaaaaaatatctagtatacgtgaactattatctatattagaacgagtt
gctaaatctaataaacctatgttaataatagcagaagatatagaaggtgaagcattagct
actttagtagttaatactatgagagggattgttaaagttgctgctgttaaagcacctgga
tttggcgatagacgtaaatctatgttacaagatatagctattttaacaggaggtactgtt
atatcagaagaaattggattagaattagataaaataaatatagagtctttaggacaatca
aaaaaaattgttataaataaagataatactactataattgatggtttaggaaaggatagt
gcaataaaaaatcgtgtaaaacaaatttatcaacaaataaaaaatgctacttctgattat
gataaagaaaaacttcaagaaagagtagcaaaacttgctggtggagtagctgttttaaaa
gtaggagcagcaacagaagtagaaatgaaagaaaaaaaagcaagagtagaagatgcttta
catgctaccagagctgctgtagaagaaggagtagtagctggtggtggtgttgcgttaata
cgtgttgcttctagaataattaatatgtctggtgataatgaagatcaaaatgtaggtatt
cgcatagcaataaaagctatggaagctcctcttcgtcaaatagtagctaatgcaggagaa
gaaccttctgttgtagctaatgctgtaaaaggtggtaaaggtaattatggttataatgca
gctactgcagaatatggtaatatgattaaatttggtatacttgatccaactaaagtaact
agatctgctttacaatatgcagcttctgttgctggtttaatggtaactacagaatgtatg
ataactgatttaccaaaagaagataaatctgacattaataatatgagcgggccatcagga
ggaattggtggtatgaataatatgatgtaa
DBGET
integrated database retrieval system
