Acinetobacter piscicola: ACDW34_02145
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Entry
ACDW34_02145 CDS
T11504
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
apis Acinetobacter piscicola
Pathway
apis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACDW34_02145 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apis03400
]
ACDW34_02145 (recD)
Enzymes [BR:
apis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACDW34_02145 (recD)
DNA repair and recombination proteins [BR:
apis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACDW34_02145 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
SH3_13
Viral_helicase1
PhoH
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
ResIII
SLFN-g3_helicase
nSTAND3
T2SSE
DEAD
PIF1
AAA_28
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XEZ57003
LinkDB
All DBs
Position
468615..470381
Genome browser
AA seq
588 aa
AA seq
DB search
MENSQNLENELPQWVSNWTNYLLQQYLNNEKLHEDSFKIISEILMTSLQGDSCLKRERQN
VDNLTPLFIDENKIHDKNQQQQHVAPFVFDDEYLYLYRYWQLEKRLAQQVIRLKQQHIEQ
ISTQYFDHLLSDLHQKNALNMVSQNAFNIITGGPGTGKTYTLARIIAVLHQALPNIRIAM
AAPTGKAAQRMGEALQKSLSDPKLQGFGLSLDVFKPVTIHRLLGLGNQHMPRFHLTQPLP
YDVIVVDEASMLDLNLATMLFEAVPENCRLILLGDANQLASVDAGSVLADLQRVPMLQDN
RVNLVTTHRFKQDAAIGKFAHFIQQSHLVEHSQSQLLQDFEQHIVTQKPIQKIELSAQMR
DVVQLEYLPEQIPHDLYMAYYQKLALGFQDYFNSLKAYLEDIESPQQIEKVIQAFDQYRI
LTAVRHGGLGLKAINAEMENTLLSAIPQIYRQGDWYVGRPVMMDYNDYQLGLSNGDIGIC
FKHRQDLEQFEVYFPSLDKWIVASRLPKSIQTAFALTIHKSQGSEFQHTMVILDAAAQKT
LSQELLYTAITRAKSVVSLLVEAGAFHQALTVATQRQSGLIKKIKNLY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaatagtcaaaatttagaaaatgaattacctcaatgggttagcaactggacaaat
tatctgttacaacagtatttaaataatgagaaattacatgaagattcatttaaaatcatc
agtgaaatcttaatgacttctttacaaggagacagttgtctaaaacgcgagaggcaaaat
gtagacaacctcacaccactatttatagatgaaaataaaattcatgataaaaatcagcaa
caacagcatgttgcaccttttgtatttgatgatgaatatttgtatttgtaccgttattgg
caacttgaaaagcgtttagcgcagcaagtgattcgcttaaaacagcaacatattgagcag
atttcaacgcaatattttgatcatttattgagtgatttacatcaaaaaaatgcgttaaat
atggtttcgcaaaatgcatttaatattattacgggtggtcctgggacaggtaaaacttac
acactggcacgtattattgctgttttacatcaggccttgcccaatattcgcattgcaatg
gcagcccctacaggaaaagcagcacaacgtatgggcgaagccttacaaaaatctttgagt
gatccaaaactacaagggtttgggttgagtttagacgtgtttaagcctgtcaccattcat
cgattattggggttgggcaatcaacatatgccacgttttcatttaacgcagcctttacct
tatgatgtgattgtggttgatgaagcatctatgttggatttaaatctcgcaacaatgctc
tttgaagccgtacctgaaaattgtcgtttgattttattgggagatgctaatcaattagct
tctgtcgatgctggctcagtcttggcggatttacaacgtgttccgatgttacaagacaat
cgggtaaatttagtgaccacacaccgttttaaacaagatgcagccattggaaaatttgcg
cattttattcaacaaagtcaccttgtagaacactctcaatcacaacttttacaagatttt
gagcagcatattgtgactcaaaagccgatacaaaaaattgaactcagcgcacagatgcgt
gatgtggtgcaattggaatacttacctgaacagattccccatgatttatatatggcgtat
taccaaaagttagcacttggttttcaagattattttaatagtttaaaggcatatttagag
gatattgaatcacctcaacaaatagaaaaagtaattcaagcttttgatcagtatcgcatt
ttaactgcagttcgccatggtggtcttggtttgaaagccattaatgctgaaatggaaaat
accttattgtctgccattccacagatttatagacaaggggactggtatgtaggtcgacct
gtgatgatggattacaatgattatcaattgggcttatctaatggtgatattgggatctgc
tttaaacatcgtcaggacctggagcagtttgaagtgtattttccaagtctagataaatgg
attgtcgcttcacgtttaccaaaatcaattcaaacagcatttgctttaaccattcataaa
tcacaaggttctgagtttcagcatacgatggtcattttggatgccgcagcacaaaaaacg
ttaagtcaagaattgctttataccgccattacccgtgcaaaatcagtagtgagcttatta
gtcgaggcaggtgcttttcatcaagcattaactgtagcaacacaaagacagagtgggttg
attaaaaaaattaaaaatttatattaa
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