Acinetobacter piscicola: ACDW34_02160
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Entry
ACDW34_02160 CDS
T11504
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
apis Acinetobacter piscicola
Pathway
apis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACDW34_02160 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apis03019
]
ACDW34_02160 (pnp)
03016 Transfer RNA biogenesis [BR:
apis03016
]
ACDW34_02160 (pnp)
Enzymes [BR:
apis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACDW34_02160 (pnp)
Messenger RNA biogenesis [BR:
apis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACDW34_02160 (pnp)
Transfer RNA biogenesis [BR:
apis03016
]
Prokaryotic type
tRNA degradation factors
ACDW34_02160 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
S1_RRP5
DUF7388
KH_DEAH11_2nd
KH_PNO1_2nd
Motif
Other DBs
NCBI-ProteinID:
XEZ57004
LinkDB
All DBs
Position
473086..475173
Genome browser
AA seq
695 aa
AA seq
DB search
MFNIVRKEFQYGQYNVVLETGRVARQANTVVITMGGVTVLVAVVAQPTAKAGQDFFPLTV
NYQEKQYAAGRIPGGYGKREGRASEAETLISRLIDRPIRPLFPEGYYNEIQVTATVVSSD
KSMEADIAAMLGTSAALAIAGTPFRGPIGAARVGLINGEYVLNPNFEQQAQSDLDLVVAG
TESAVLMVESEAKELSEDQMLGAVLFGHDEMQIAIQAIKEFAAAAGAKESDWVAPAKNED
LRAKLKEAFEAKISEAYTIAVKQDRYAALDALHAEAVAQFVPENDETGIADELNELFEDL
KYRTVRDNILSGKPRIDGRDTKTVRALDVQVGVLDRAHGSALFTRGETQALVTTTLGNTR
DALMVDTLAGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPAADR
FPYVIRIVSDITESNGSSSMASVCGASLSLMDAGVPLKAPVAGIAMGLVKEGERFAVLSD
ILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAYAGRMHILNAMNQV
ISRARPEISMFAPTFQVININPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVFGE
SKAAAQAAIAKIQALTAEVEPGTIYTGKVIRIVEFGAFVNILPGTDGLLHISQISNERVA
NVSDVLAEGQEIKVQVADVDNRGRIKLTMKDIAQA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatatcgttcgtaaagaatttcaatatggtcagtacaatgttgtacttgaaacg
ggtcgtgttgcgcgtcaagcaaatactgttgtcattactatggggggcgtaaccgtttta
gttgctgttgttgctcaaccgactgcaaaagcaggtcaagacttcttcccacttacagta
aactaccaagaaaaacaatatgctgcgggtcgtatcccgggcggttatggtaagcgtgaa
ggtcgtgcttcagaagctgaaactttaatctctcgtttgattgaccgtccaattcgtcca
ttgtttccagaaggttactataacgaaattcaagtgactgcaactgtagtgtcttctgac
aaatctatggaagctgacattgctgcaatgttaggtacttctgctgcacttgccatcgca
ggtactcctttccgtggtccaatcggtgcggcacgtgttggtttaatcaacggtgaatat
gttcttaacccgaactttgaacaacaagctcaatctgatttagatttagtggttgcaggt
actgaatctgcagtactcatggttgaatctgaagcgaaagaactttcagaagaccaaatg
cttggcgcagtacttttcggtcatgacgaaatgcaaattgcgatccaagcgattaaagaa
tttgcagctgctgcaggtgcgaaagagtctgactgggttgctccagcgaaaaatgaagac
cttcgtgcgaaattaaaagaagcttttgaagcgaaaatctcagaagcctataccattgca
gtgaaacaagaccgttatgctgcacttgatgcacttcatgctgaagcagtagctcagttc
gttccagaaaacgacgaaactggcattgcagatgaattaaacgaattattcgaagatctt
aaatatcgtacagtacgtgacaatatcttgtctggtaagccacgtatcgatggtcgtgat
acgaaaactgttcgtgcgcttgatgtacaagtgggtgtattggatcgtgcacacggttct
gcattgttcacacgtggtgaaactcaagcattagtgacaacgacattaggtaatacacgt
gatgcgttgatggtcgatacccttgcaggtacgaaaactgataacttcatgcttcactac
aacttccctgcatactctgtaggtgaaacaggtcgtgagtctggtcctaaacgccgtgaa
atcggtcatggtcgtctagcacgtcgtggtgttcaagctgttcttcctgcagctgaccgc
ttcccgtacgtcatccgtatcgtatctgacatcactgaatctaacggttcatcttcaatg
gcttctgtatgtggtgcttcattgtcacttatggatgcaggtgttccacttaaagcacca
gttgcgggtatcgcaatgggtctagtgaaagaaggcgaacgttttgccgttctttctgac
atcttgggtgacgaagatcaccttggtgacatggactttaaagtggcaggttctgcaaac
ggtattactgcgcttcaaatggacatcaagatcgaaggtattactgaagagatcatggaa
gttgcattgaatcaagcgtatgcaggtcgtatgcacatccttaatgcaatgaaccaagtg
atttcacgtgcgcgtcctgaaatttcaatgtttgcaccaacattccaagtgatcaacatc
aaccctgataaaatccgtgatgtgatcggtaaaggtggtgcaaccattcgtcaaatcaca
gaagaaaccaaagctgcgattgatattgaagacaatggtacagtacgtgtatttggtgag
tctaaagcggctgctcaagctgcaattgcaaaaatccaagcactgactgctgaagttgaa
ccaggtacaatttatacaggtaaagtgattcgtatcgttgaattcggtgcgttcgtgaat
atccttccaggtactgacggtttacttcatatttctcaaatttcaaatgaacgtgtcgct
aatgtgtcagatgttcttgctgaaggtcaagaaatcaaagtacaagttgctgatgtagac
aatcgtggtcgtatcaaattaacaatgaaagacattgcacaagcttaa
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