Acinetobacter piscicola: ACDW34_02655
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Entry
ACDW34_02655 CDS
T11504
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
apis Acinetobacter piscicola
Pathway
apis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACDW34_02655 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apis03021
]
ACDW34_02655 (rpoA)
03400 DNA repair and recombination proteins [BR:
apis03400
]
ACDW34_02655 (rpoA)
Enzymes [BR:
apis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACDW34_02655 (rpoA)
Transcription machinery [BR:
apis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACDW34_02655 (rpoA)
DNA repair and recombination proteins [BR:
apis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACDW34_02655 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
XEZ55840
LinkDB
All DBs
Position
560843..561850
Genome browser
AA seq
335 aa
AA seq
DB search
MTRTANEFLTPQAIKVEAASGTSAKVILEPLERGFGHTLGNALRRILLSSLPGAAVVEVE
IEGVEHEYSTLEGLQQDIVELLLNLKGLSIKLFDQNEAYLTLEKQGPGDVTAADLRLPHN
VEVVNPEHVIGTLSATGSLKMRLKVAQGRGYETSDSRFPEGETRPVGRLQLDASYSPIKR
VSYTVENARVEQRTDLDKLVIDLETNGTVDPEEAIRKAATILQQQIAIFVDLQKDQAPVA
QEPREEVDPILLRPVDDLELTVRSANCLKAENIYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLQLGMRLENWPPASLRMDDRFAYRSR
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgtactgcaaacgagtttcttactccgcaagcgatcaaggtcgaagcggcaagc
gggacctcggcgaaagtgattctagaacctttagagcgtggctttggtcatactctgggg
aatgctttacgtcgcattctattatcttctttgcctggcgctgctgtggttgaagtggaa
atagaaggtgtcgagcacgagtacagtactttagaaggcttgcagcaggacatcgtcgag
ctcttgctgaacctaaaaggattgtctattaagctgttcgatcaaaacgaagcatattta
acattagaaaaacaaggtcctggcgatgtaactgctgctgatcttcgtttgccacataat
gttgaagtggttaaccctgaacatgtgatcggcactttaagtgctacaggctcattaaaa
atgcgcttgaaagttgctcaaggtcgtggttatgaaacatctgactcacgcttccctgaa
ggcgaaactcgcccagtgggtcgtttacagttagatgcttcttatagcccaatcaaacgt
gtttcttataccgtagaaaatgcgcgtgtagaacaacgtactgaccttgataaattggtc
attgatcttgaaacaaatggtactgtagatccagaagaagcgatccgcaaagcggcaaca
atcttgcaacaacaaattgcaatttttgttgatcttcagaaagatcaagcgccagtggct
caagaacctcgtgaagaagttgacccaatcttgcttcgtccagtagatgatctagagctt
actgttcgttctgctaactgtttgaaagcagaaaatatttactacattggtgatttagta
caacgtactgaagttgagttattaaaaactcctaacttaggtaaaaaatcgttgactgaa
atcaaagatgttctggcttcaaaaggcttacaactcggcatgcgtttagaaaactggcca
ccagctagtttgcgtatggacgatcgttttgcctatcgtagccgttaa
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