KEGG   Acinetobacter piscicola: ACDW34_16025
Entry
ACDW34_16025      CDS       T11504                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
apis  Acinetobacter piscicola
Brite
KEGG Orthology (KO) [BR:apis00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:apis03016]
    ACDW34_16025 (truB)
Enzymes [BR:apis01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     ACDW34_16025 (truB)
Transfer RNA biogenesis [BR:apis03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    ACDW34_16025 (truB)
 Prokaryotic type
    ACDW34_16025 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2
Other DBs
NCBI-ProteinID: XEZ55047
LinkDB
Position
complement(3290244..3291149)
AA seq 301 aa
MSVKSPKIQRRPISGVFLLNKPLGISSNAALQRVRWLFRAEKGGHTGALDPLASGLLPIC
LGEATKFSHFLLDSTKRYQTTIHLGHSTTTGDVEGEVLLEQAVPELTQAQIQKVLTQFTG
DLLQVPPMYSALKKEGRPLYELARKGIEIEREARPIVIENIQLLSFTADSITLDVTCSKG
TYIRVLGEDIAKALGTYGHLTYLHRIQTGQFELNAEWTIEYLESLTEQEREALLLPVYAP
IDHFPKVQVPEGRAEYFCRGMESNIDHVAAAHAVVFDGEKCLGLAEITEKKRLVPKRVLN
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtctgtcaaatcacccaaaatccagcgtcgtcccattagtggcgtttttttattaaat
aaaccacttggtattagctcaaatgctgctttacaacgtgtacgatggttatttcgtgca
gaaaagggagggcatacgggtgcattagacccacttgcttctggactattgcccatttgt
ttaggtgaggcaactaaattttctcattttttactcgactcaactaaacgttatcagacc
actattcatttaggtcatagtacaactacaggtgatgtcgaaggtgaagtcttacttgaa
caagccgtacctgaactgactcaagcgcaaattcagaaggtactgacacagtttacaggt
gatctcctccaagttcctccgatgtattcagcattgaaaaaagagggtcgtcctttatat
gagttggcacgtaaggggattgagattgagcgtgaagcacgtcctattgttattgaaaat
attcaattattatcttttacggcagattccatcactttagatgtcacgtgttcaaaggga
acgtacattcgtgttttaggtgaagatattgcgaaagcattgggtacatatgggcattta
acttatttacatcgaattcaaacagggcagtttgaactgaatgctgaatggactattgaa
tatttagaaagtttaactgagcaagaacgtgaagctttgttgctgcctgtgtatgcaccg
attgaccactttccaaaagtgcaagtgcctgaagggcgtgcagaatatttttgtcgaggt
atggaaagtaatattgatcatgttgcggcagcgcacgcagtggtatttgatggggaaaaa
tgtttaggcttggcagaaattactgagaaaaaacgtttggtgcccaaacgtgtcttgaac
ttgtaa

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