Actinobacillus pleuropneumoniae JL03 (serotype 3): APJL_0261
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Entry
APJL_0261 CDS
T00644
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
apj
Actinobacillus pleuropneumoniae JL03 (serotype 3)
Pathway
apj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
APJL_0261 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apj03400
]
APJL_0261 (recD)
Enzymes [BR:
apj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
APJL_0261 (recD)
DNA repair and recombination proteins [BR:
apj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
APJL_0261 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Helicase_RecD
Viral_helicase1
SLFN-g3_helicase
PIF1
SH3_13
AAA_22
UvrD-helicase
nSTAND3
ResIII
TrwB_AAD_bind
DEAD
NTPase_1
CbiA
NACHT
AAA_16
AAA_17
SRP54
AAA_28
NPHP3_N
T2SSE
AAA_7
UvrD_C
Zeta_toxin
MukB
AAA
AAA_25
HypD
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ABY68860
UniProt:
B0BSQ8
LinkDB
All DBs
Position
279340..281259
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AA seq
639 aa
AA seq
DB search
MLTLLYELKETNVISELDYQFAKMIDRKQQSYPYTEQQKNLAVLLAALVSFHVMHGHAAI
RLDSQASRFFFGLSNRNEEKALNDEILQKIGGITPLEWQDVLQNHIAFSSDPKQVAPMLF
QHGLLYFYRYWQAENNIANYLVKAVEFPEQIANTALNKQILEKLFEKSDEINWQKIAVAT
AIKQKFSIISGGPGTGKTTTVAKLLAALQEKQLRSGKAMLNVALVAPTGKAAARLKESIT
LSLSVLNLNFEIPTTASTIHRLLGIRPQSDEPRYHSKNPLHIDLLVVDEASMIDLFLMEK
LMAALKPNTRLIILGDKDQLASVEAGAIMGELGAFLQQGYSRKHCDYLNQVTEYQLVPKG
KSLPICDSLCHLKKSYRFDANSGIGQLAKLVNEKQAVESWQLFAKGSADLSLIEYAHTSD
FPEKQQWIQNCVKQITDKAVELYKEYLTLVKQRYNNPTKVSVNEIFEVFQKVRFLSALRI
SELGVEQLNKRIETALATAKLISLEQSKNYYIGKPLLITQNSPQNHIYSGDIGIILPDEN
GISRVYFDTKIDDGYLSLSLNRLPEFEPAYVMTVHKSQGSEFEHTLLITPLHFAPVMSKE
LIYTAITRAKKHFTLFGEKQVWLQAVNNNLQLRLKAQLL
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgcttttatatgagttaaaagaaacgaatgtgatttccgaattggattatcaa
ttcgctaaaatgattgatcgtaaacagcaaagttatccctataccgaacaacaaaaaaac
ttggcggtattgcttgccgcattagtttcttttcacgtaatgcacggtcatgccgctatt
cgtttggattctcaagcctcacggttttttttcggtttatcaaatcgaaatgaggaaaag
gcgcttaatgatgaaattttgcaaaaaatcggcggaatcacgccgcttgaatggcaggac
gtactacaaaaccatattgcgtttagttcggatcctaagcaagtcgcaccgatgttgttt
caacacgggttactttatttttatcgttattggcaggcggaaaacaatattgcgaattac
ttagtgaaagcggtcgaatttcccgaacaaattgccaataccgcattgaataagcaaatt
ctagaaaaactatttgaaaagtcggatgaaataaattggcaaaaaatagcggtcgctacg
gctatcaaacaaaagtttagcataatttcaggcgggccgggaaccggtaaaactacaacg
gtcgccaaattattagctgcgttgcaagaaaaacagctacgtagcggtaaagcaatgttg
aatgttgcgcttgttgcaccgacaggaaaagcggcggcacgtttaaaagagtcaatcaca
ttaagtttaagcgtgcttaatttgaattttgaaattccaacgaccgcctcgacaattcat
cgtttgttaggaatacgtccgcaaagtgatgagcctcgttatcactcaaaaaatccgtta
catattgatcttttagtggtggatgaagcgtctatgattgatcttttcttaatggaaaaa
ttaatggcggcattaaaaccgaatacccgattaattattttaggcgataaagatcagctt
gcgtcggttgaagccggagcgattatgggagaactcggagcgtttcttcaacagggatat
agccggaaacattgcgattatttgaatcaagttaccgagtatcaattagttccgaaagga
aaatcattacctatttgtgattcgttatgtcatttgaaaaaaagttatcgttttgacgct
aattccggaatcggtcagttggcgaaactggttaatgaaaagcaagcggttgaatcttgg
caactttttgcaaaaggctcagcggatttatctttgatcgaatatgcacacacttcggat
ttcccggaaaaacagcagtggattcaaaattgcgtgaaacaaataacagataaagcggtc
gagctttataaggaatatctaacgcttgttaaacaacgttacaataatccgacgaaagtg
tcggtaaatgaaattttcgaggtttttcaaaaagtaagattcttatccgcattgcgtata
agtgaattgggcgtagagcaattaaataaaaggatagaaacggcattagcgacggcaaaa
ctgatttctttagaacaaagtaaaaattactatatcggtaaaccgttactcattacacag
aactcgccgcaaaatcatatttatagcggcgatatagggattatcttaccggatgagaac
ggaatatcgagagtttattttgatacgaaaattgacgatggatatttaagtctttctctg
aatagacttcccgaatttgaaccggcttatgtaatgacggttcataagtcgcaaggttct
gaattcgaacataccttactgataacgccattgcactttgcaccggttatgagtaaagaa
ttaatttatacggcgattacccgagctaaaaagcattttactttattcggagaaaaacaa
gtttggttacaggcggtgaataataatcttcagctaaggttaaaagctcaattactttag
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